DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHBDF1 and stet

DIOPT Version :10

Sequence 1:XP_047290434.1 Gene:RHBDF1 / 64285 HGNCID:20561 Length:932 Species:Homo sapiens
Sequence 2:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster


Alignment Length:224 Identity:52/224 - (23%)
Similarity:92/224 - (41%) Gaps:57/224 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   727 PDQFYRLWLSLF---LHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 788
            ||:.:.:|..||   ||||.||...::..|:.....||.:.|..|||.||....:.|:|.::||.
  Fly   262 PDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFD 326

Human   789 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFL-FTFGLLPW--------- 843
            |....||.:|..:.:||.....:..::..:.   ....|||.:::|: |.||...:         
  Fly   327 PDVFLVGASGGVYALLAAHLANVLLNYHQMR---YGVIKLLHILVFVSFDFGFAIYARYAGDELQ 388

Human   844 ------------------IDNFAHISGFISGLFLSFAFLP------------YISFGKFDLYRKR 878
                              :...||::|.|:||.:....|.            :|:.|.:      
  Fly   389 LGSSSEFLAIDQAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTY------ 447

Human   879 CQIIIFQVVFLGLLAGLVVLFYVYPVRCE 907
            ..:::|.:.| .::.|    |.::.:|.|
  Fly   448 LALVVFAIAF-NIMNG----FAMFNIRVE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHBDF1XP_047290434.1 Rhomboid_SP 168..362 CDD:463639
Rhomboid 724..867 CDD:426384 44/182 (24%)
stetNP_788450.1 EF-hand_7 87..157 CDD:463900
Rhomboid 262..428 CDD:426384 43/168 (26%)
Blue background indicates that the domain is not in the aligned region.

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