Protein Alignment RAB17 and rab5c

DIOPT Version :9

• Sequence 1: XP_016860182.1
• Gene: RAB17 / 64284
• HGNCID: 16523
• Length: 338
• Species: Homo sapiens
• Sequence 2: NP_958909.1
• Gene: rab5c / 386807
• ZFINID: ZDB-GENE-031118-30
• Length: 221
• Species: Danio rerio
• Alignment Length: 137
• Identity: 68/137 - (49%)
• Similarity: 96/137 - (70%)
• Gaps: 4/137 - (2%)

Human    12 AAPSQPRV--FKLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWD 73
            |||...::  |||||||..:||||||.||:||..|.... .|:|.||.|:.:.:..|::|.||||
Zfish    13 AAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWD 77

Human    74 TAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQ 138
            |||||:|||:..:|:|||.||::|||||..|:|.:|:.|:|:|:.:..| .:::.|.|||.||:.
Zfish    78 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASP-NIVIALAGNKADLAN 141

Human   139 EREVTFQ 145
            :|.|.||
Zfish   142 KRAVDFQ 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB17	XP_016860182.1	None
rab5c	NP_958909.1	Rab5_related	22..184	CDD:206653	65/128 (51%)
		Ras	24..185	CDD:278499	64/126 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0092
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
NCBI	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.820