Protein Alignment RAB17 and rab-5

DIOPT Version :9

• Sequence 1: XP_016860182.1
• Gene: RAB17 / 64284
• HGNCID: 16523
• Length: 338
• Species: Homo sapiens
• Sequence 2: NP_492481.1
• Gene: rab-5 / 172755
• WormBaseID: WBGene00004268
• Length: 208
• Species: Caenorhabditis elegans
• Alignment Length: 140
• Identity: 66/140 - (47%)
• Similarity: 97/140 - (69%)
• Gaps: 3/140 - (2%)

Human     7 TPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLE 70
            |.:| ..|::...|||||||..:||||||.||:||..|.... .|:|.||.|:.|.:...::|.|
 Worm     8 TARP-GGPNRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFE 71

Human    71 IWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTD 135
            ||||||||:|||:..:|:|||.||::|||||.::||.||:.|:|:|:.:..| .:::.|.|||.|
 Worm    72 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP-NIVMALAGNKAD 135

Human   136 LSQEREVTFQ 145
            ::.:|.|.::
 Worm   136 VANKRTVEYE 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB17	XP_016860182.1	None
rab-5	NP_492481.1	Rab5_related	19..181	CDD:206653	63/128 (49%)
		Ras	21..181	CDD:278499	62/126 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0092
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920