DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF2 and Rbp1

DIOPT Version :10

Sequence 1:NP_003007.2 Gene:SRSF2 / 6427 HGNCID:10783 Length:221 Species:Homo sapiens
Sequence 2:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster


Alignment Length:121 Identity:46/121 - (38%)
Similarity:60/121 - (49%) Gaps:16/121 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
            |.||....|...:...|.|||.:.:|::.|:     ..|||||.|.|:||||||..|:||....|
  Fly    15 VGNLGSSASKHEIEGAFAKYGPLRNVWVARN-----PPGFAFVEFEDRRDAEDATRALDGTRCCG 74

Human    83 RELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRS 138
            ..:||:|:. ||..|          ||.|.||...||.|.|.|....:|:.|.:.|
  Fly    75 TRIRVEMSS-GRSRD----------RRRGEGGSSGRSGSGRYRITPSARTTSTATS 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF2NP_003007.2 RRM_SRSF2_SRSF8 16..88 CDD:409751 28/69 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..221 16/47 (34%)
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 29/70 (41%)

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