DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF1 and lark

DIOPT Version :10

Sequence 1:NP_008855.1 Gene:SRSF1 / 6426 HGNCID:10780 Length:248 Species:Homo sapiens
Sequence 2:NP_523957.1 Gene:lark / 38811 FlyBaseID:FBgn0011640 Length:352 Species:Drosophila melanogaster


Alignment Length:14 Identity:6/14 - (42%)
Similarity:7/14 - (50%) Gaps:0/14 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    69 AVVTCKVSSINSRF 82
            |...|:.||...||
  Fly    17 ATFDCRGSSDTVRF 30

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF1NP_008855.1 RRM1_SRSF1 12..90 CDD:410010 6/14 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..134
RRM2_SRSF1 113..196 CDD:410160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..248
Interaction with SAFB1 198..247
larkNP_523957.1 RRM1_2_CoAA_like 8..73 CDD:409779 6/14 (43%)
RRM1_2_CoAA_like 87..152 CDD:409779
hnRNP-R-Q <88..>258 CDD:273732
Blue background indicates that the domain is not in the aligned region.

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