DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCG8 and w

DIOPT Version :10

Sequence 1:NP_071882.1 Gene:ABCG8 / 64241 HGNCID:13887 Length:673 Species:Homo sapiens
Sequence 2:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster


Alignment Length:599 Identity:180/599 - (30%)
Similarity:294/599 - (49%) Gaps:54/599 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    88 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGG--KIKSGQIWINGQPSSPQLVRKCVAH 150
            ::|:......|::||::||||.|:.:||:.:..|...|  ...||...:||||...:.::...|:
  Fly   113 LKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAY 177

Human   151 VRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVG-NMYVRGLS 214
            |:|.:..:.:||.||.|.|.|.:|:||..:..||..||:.||.||.|.:|..|.:| ...|:|||
  Fly   178 VQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLS 242

Human   215 GGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVLISLHQPRSDIFRL 279
            ||||:|::...:.|.:|.:||.|||||||||||||::|:.|.:|::..:.|::::|||.|::|.|
  Fly   243 GGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFEL 307

Human   280 FDLVLLMTSGTPIYLGAAQHMVQYFTAIGYPCPRYSNPADFYVDLTSIDRRSREQELATREKAQS 344
            ||.:|||..|...:||.....|.:|:.:|..||...|||||||.:.::   ...:|:.:|::...
  Fly   308 FDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAV---VPGREIESRDRIAK 369

Human   345 LAALF-LEKV-RDLDDFLWKAETKDLDEDTCVESSVTPLDTNCLPSP----TKMPGAVQQFTTLI 403
            :...| :.|| ||::..|   .||:|::         ||:     .|    |.......||..::
  Fly   370 ICDNFAISKVARDMEQLL---ATKNLEK---------PLE-----QPENGYTYKATWFMQFRAVL 417

Human   404 RRQISNDFRDLPTLLIHGAEACLMSMTIGFLYFGHGSIQLSFMDTAALLFMIGALIPFNVILDVI 468
            .|...:..::...:.:...:..::::.||.::.|....|:..|:....:|:....:.|..:...|
  Fly   418 WRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATI 482

Human   469 SKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLHFL 533
            :...||..:...|....||....||..|.:.|||......:::....|.:..||.|    :||| 
  Fly   483 NVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAG----VLHF- 542

Human   534 LVWLVVFCCRIMALAAAALLPTF-----------HMASFFSNALYNSFYLAGGFMINLSSLWTVP 587
                  |.|..:....|.:..:|           .||......:...|.|.|||.:|..|:....
  Fly   543 ------FNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYL 601

Human   588 AWISKVSFLRWCFEGLMKIQFS---RRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIG 649
            .|:|.:|:.|:..|||:..|::   .........|.|...||..||..:...:..|...|:.:..
  Fly   602 KWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAI 666

Human   650 LSGGFMVLYYVSLR 663
            |...|.||.|::||
  Fly   667 LIVSFRVLAYLALR 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCG8NP_071882.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
ABCG_White 60..295 CDD:213201 86/209 (41%)
3a01204 88..663 CDD:273361 178/597 (30%)
wNP_476787.1 3a01204 68..687 CDD:273361 180/599 (30%)
Blue background indicates that the domain is not in the aligned region.

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