DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL2 and Atl2

DIOPT Version :9

Sequence 1:NP_001317392.1 Gene:ATL2 / 64225 HGNCID:24047 Length:584 Species:Homo sapiens
Sequence 2:NP_001344682.1 Gene:Atl2 / 56298 MGIID:1929492 Length:588 Species:Mus musculus


Alignment Length:586 Identity:543/586 - (92%)
Similarity:554/586 - (94%) Gaps:4/586 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCPVQIVL 65
            |||||||||.|||.|||.|||:|||.|..||||||||||||:|||||||||||||||||||||||
Mouse     1 MAEGDEAARRQQPQQGLRRRRQTSDSSVGVNHVSSTTSLGEDYEDDDLVNSDEVMKKPCPVQIVL 65

Human    66 AHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGN 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 AHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGN 130

Human   131 NEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALST 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 NEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALST 195

Human   196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260

Human   261 QFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELR 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   261 QFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELR 325

Human   326 NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGA 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGA 390

Human   391 RDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEET 455
            ||.||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||
Mouse   391 RDVYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVALKQFRSVKKMGGDEFCRRYQDQLEAEIEET 455

Human   456 YANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAY 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||
Mouse   456 YANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALTSLCTWAY 520

Human   521 VKYSGEFREIGTVIDQIAETLWEQRSPRKVF----SKLFEVTRRRMVHRALSSAQRQRLSSNNNK 581
            ||||||||||||:|||||||||||||||||.    ..|.|...|:.|..::.:....::|.:...
Mouse   521 VKYSGEFREIGTMIDQIAETLWEQRSPRKVLKPLGDNLMEENIRQSVTNSIKAGLTDQVSHHARL 585

Human   582 K 582
            |
Mouse   586 K 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL2NP_001317392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 34/42 (81%)
GBP 70..341 CDD:280433 270/270 (100%)
Atl2NP_001344682.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 35/43 (81%)
GBP 70..341 CDD:308078 270/270 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83960334
Domainoid 1 1.000 558 1.000 Domainoid score I6008
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56949
Inparanoid 1 1.050 1151 1.000 Inparanoid score I4680
Isobase 1 0.950 - 0 Normalized mean entropy S2627
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG58971
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto119906
orthoMCL 1 0.900 - - OOG6_102856
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4011
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1919.250

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