DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL2 and atl2

DIOPT Version :9

Sequence 1:NP_001317392.1 Gene:ATL2 / 64225 HGNCID:24047 Length:584 Species:Homo sapiens
Sequence 2:XP_004914749.1 Gene:atl2 / 100379898 XenbaseID:XB-GENE-947235 Length:573 Species:Xenopus tropicalis


Alignment Length:584 Identity:475/584 - (81%)
Similarity:528/584 - (90%) Gaps:13/584 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSD-EVMKKPCPVQIV 64
            ||||.....         |.|..|..:..:|||...   .:||.::..:||| |||:||||:|||
 Frog     1 MAEGGSLRN---------RTRFGSRSNETMNHVDYP---DDNYVEEIQLNSDTEVMEKPCPIQIV 53

Human    65 LAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGG 129
            |||||||||||||.|||.||:||||||||:||:|||||||||||||||||||:||::.|.|||||
 Frog    54 LAHEDDHNFELDETALESILMQEHIRDLNVVVLSVAGAFRKGKSFLLDFMLRFMYSQSSSSWIGG 118

Human   130 NNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALS 194
            :.||||||||||||||||||||:|:||||:::|:|:||||:||||||||||||||||||||||||
 Frog   119 DYEPLTGFTWRGGCERETTGIQIWSEVFVVEKPDGSKVAVMLMDTQGAFDSQSTIKDCATVFALS 183

Human   195 TMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGG 259
            ||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||:|||:||
 Frog   184 TMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYKKPFQTLMFLIRDWSYPYEHTYGLKGG 248

Human   260 KQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKREL 324
            ..||||||||||||||||||||||||:||:|:||||||||||||||||.|||||.:||::||:||
 Frog   249 NSFLEKRLQVKQNQHEELQNVRKHIHSCFTNIGCFLLPHPGLKVATNPYFDGRLAEIDDEFKKEL 313

Human   325 RNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAG 389
            |.||||||||||||||||||||||||||:||||||||||||||||||||||||||||||:|||||
 Frog   314 RELVPLLLAPENLVEKEISGSKVTCRDLLEYFKAYIKIYQGEELPHPKSMLQATAEANNMAAVAG 378

Human   390 ARDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEE 454
            |:|||.:|||||||||||||||||||||||||||..||||||||||||:||||||||||||||||
 Frog   379 AKDTYSRSMEQVCGGDKPYIAPSDLERKHLDLKESCIKQFRSVKKMGGEEFCRRYQDQLEAEIEE 443

Human   455 TYANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWA 519
            :|||||||||||||||||||||||||||||||||||||||||:||||.:|||:|||||:..||||
 Frog   444 SYANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGMNSIATICNLIMGLALLSFCTWA 508

Human   520 YVKYSGEFREIGTVIDQIAETLWEQRSPRKVFSKLFEVTRRRMVHRALSSAQRQRLSSNNNKKK 583
            ||||||||||:||:||||||.:||||||:|||||||||.:||:...||:||.|.|:.:|||:||
 Frog   509 YVKYSGEFRELGTLIDQIAEIIWEQRSPKKVFSKLFEVCKRRVPRVALTSALRHRIPTNNNRKK 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL2NP_001317392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 11/42 (26%)
GBP 70..341 CDD:280433 235/270 (87%)
atl2XP_004914749.1 P-loop_NTPase 59..330 CDD:304359 235/270 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 503 1.000 Domainoid score I3688
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56949
Inparanoid 1 1.050 924 1.000 Inparanoid score I3543
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto153498
Panther 1 1.100 - - LDO PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.160

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