| Sequence 1: | NP_071758.1 | Gene: | LHX5 / 64211 | HGNCID: | 14216 | Length: | 402 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_620605.1 | Gene: | Lhx5 / 124451 | RGDID: | 71079 | Length: | 402 | Species: | Rattus norvegicus |
| Alignment Length: | 402 | Identity: | 397/402 - (98%) |
|---|---|---|---|
| Similarity: | 397/402 - (98%) | Gaps: | 0/402 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKCA 65
Human 66 GCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSSLKEGSL 130
Human 131 NSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETL 195
Human 196 KAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRP 260
Human 261 LGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGPPSQAQSPADSSFLAASGPGSTPLGA 325
Human 326 LEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGTLHPMPGEVFSGGPSPPFPMSGTSGYSGPLS 390
Human 391 HPNPELNEAAVW 402 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LHX5 | NP_071758.1 | LIM1_Lhx1_Lhx5 | 5..56 | CDD:188753 | 50/50 (100%) |
| LIM2_Lhx1_Lhx5 | 64..119 | CDD:188761 | 54/54 (100%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 124..186 | 60/61 (98%) | |||
| Homeobox | 183..237 | CDD:395001 | 53/53 (100%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 298..402 | 101/103 (98%) | |||
| PHA03378 | <301..>392 | CDD:223065 | 88/90 (98%) | ||
| Lhx5 | NP_620605.1 | LIM1_Lhx1_Lhx5 | 5..56 | CDD:188753 | 50/50 (100%) |
| LIM2_Lhx1_Lhx5 | 64..119 | CDD:188761 | 54/54 (100%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 124..186 | 60/61 (98%) | |||
| Homeobox | 183..237 | CDD:395001 | 53/53 (100%) | ||
| PHA03378 | <247..>392 | CDD:223065 | 140/144 (97%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 298..402 | 101/103 (98%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83693831 | |
| Domainoid | 1 | 1.000 | 347 | 1.000 | Domainoid score | I12938 |
| eggNOG | 1 | 0.900 | - | - | E33208_3B9QY | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H40621 | |
| Inparanoid | 1 | 1.050 | 833 | 1.000 | Inparanoid score | I7125 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG44993 | |
| OrthoDB | 1 | 1.010 | - | - | D1070389at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002932 | |
| OrthoInspector | 1 | 1.000 | - | - | oto140919 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105769 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24208 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1931 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.270 | |||||