DRSC/TRiP Functional Genomics Resources

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Protein Alignment POPDC3 and bves

DIOPT Version :10

Sequence 1:NP_071756.2 Gene:POPDC3 / 64208 HGNCID:17649 Length:291 Species:Homo sapiens
Sequence 2:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster


Alignment Length:215 Identity:62/215 - (28%)
Similarity:116/215 - (53%) Gaps:3/215 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    30 YHLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVH 94
            :.|......:.|:...|.:|.|::.::|.:|.|...:..::...|.|:..|:.:...:.|:..|.
  Fly   103 FQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDVILWSGMGLFVNFIYLVV 167

Human    95 IAYQVRSITFAREFQVLYSSLFQPLGISLPVFRTIALSSEVV-TLEKEHCYAMQGKTSIDKLSLL 158
            :..::|.:.|.:|.:.:|.:|||||.::...|:.:....:|: .|:.:..||.:..|.:|.|||:
  Fly   168 VLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFKKVLNCMKVIRALKYQEVYAQEKVTKVDSLSLV 232

Human   159 VSGRIRVTVDGEFLHYIFPLQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQ 223
            :||::.|:.....||.:||.||||||||..:  :.:..|||::.|..:.|.:.|.|.||.|....
  Fly   233 LSGKLVVSQHQRALHIVFPHQFLDSPEWFGV--STDDYFQVSIMAMEESRVLIWHRDKLKLSIMA 295

Human   224 HRYISRLFSVLIGSDIADKL 243
            ..::..:|..::|.|:..||
  Fly   296 EPFLQTVFDHILGRDVVKKL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POPDC3NP_071756.2 Popeye 25..248 CDD:461448 62/215 (29%)
bvesNP_608426.1 Popeye 98..320 CDD:461448 62/215 (29%)

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