Sequence 1: | XP_017450571.1 | Gene: | Plec / 64204 | RGDID: | 621649 | Length: | 4704 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
Alignment Length: | 4626 | Identity: | 875/4626 - (18%) |
---|---|---|---|
Similarity: | 1601/4626 - (34%) | Gaps: | 1448/4626 - (31%) |
- Green bases have known domain annotations that are detailed below.
Rat 307 SDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMN-KV 370
Rat 371 YRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRVPGAQDGVRAN 435
Rat 436 ELQLRWQEYRELVLLLLQWI---RHHTAAFEERKFPSSFEEIEILWCQFLKFKETELPAKEADKN 497
Rat 498 RSKGIYQSLEGAV-QAGQLKIPPGYHPL-DVEKEWGKLHVAILEREKQLRSEFERLECLQ-RIVS 559
Rat 560 KLQMEAGLCEEQLNQADSLLQSDIRLLASGKAAQRAGEVERDLD---------KADGM------- 608
Rat 609 -----------------IRLLFND---------VQTLKDGRHPQGEQMYRRVYRLHERL------ 641
Rat 642 ----------VAIRTEYNLRLKAGVGAPVTQVTLQSTQRR-----PELEDSTLRYL-------HD 684
Rat 685 LLAWVEENQRRI---------------DG-----AEWGVDLPSV-------EAQLGS-HRGMHQS 721
Rat 722 ---------------IEEFRAK--IER-----ARNDESQLSP------ATRGAYRDCLGRLDLQY 758
Rat 759 AKLLNSSKARLRSLESLHGFVAAATKELMWLNEKEEEEVGFDWSDRNTNM---------AAKKES 814
Rat 815 YSALMREL-EMKEKKIKEIQNTGDRLLREDHPARPTVESFQAAL---QTQWSWMLQLCCCIEAHL 875
Rat 876 KENTAYFQFFSDVREAEEQLQKLQETLRR------------KYSCDRSITVTRLE-------DLL 921
Rat 922 Q--------------DAQDEKEQLNE--------------YKGHLSGLAKRAKAIVQLKPRNPAH 958
Rat 959 PVRGHVP----LLAVCDYKQVEVTVH----KGD-------QCQLVGPAQPFHWKVLGGS------ 1002
Rat 1003 ----SSEAAVPSVCFLVPPPNQEAQEAVARLEAQHQALVTLWHQLHVDMK---SLLAWQSLNRDI 1060
Rat 1061 Q-----LIRSWSLVTFRTLKPEEQRQ------ALRNLELHYQ-----------AFLRDSQDAGGF 1103
Rat 1104 GPEDRLVAEREYGSCSRHYQQLLQSLEQGEQEESRCQRCISELKDIRLQLEACETRTVHRLRLPL 1168
Rat 1169 DKD-------------------------PARECAQRIAEQQ----KAQAEVEGLGKGVARLSAEA 1204
Rat 1205 EKVLALPEPS-----PAAP------TLRSELELTLGKLEQVRSLSAIYLE-KLKTISLVIRS--- 1254
Rat 1255 ----TQGAEEVLKTH---------------------------EEHLKEAQAVPATLQELEVTKAS 1288
Rat 1289 LKKLRAQAEAQQPVFNTLRDELRGAQEVGERLQQRHGERDVEVERWRERVTQLLERWQA----VL 1349
Rat 1350 AQTDVR---QRELEQLGRQLRYYRE--SADPLSSWLQDAKSRQEQIQAVPIANS----------- 1398
Rat 1399 -----QAAREQLRQEKALLEEIERHGE-KVEECQKFA-----------------------KQYIN 1434
Rat 1435 AIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFISETLR 1499
Rat 1500 RMEEEERLAEQQRAEERERLAEVEAALEKQRQ-----------LAEA--------------HAQA 1539
Rat 1540 KAQAELEARELQ----RRMQEEVTR----------------REEAAVDAQQQKRS---------- 1574
Rat 1575 -------------------------------------------------IQEELQH------LRQ 1584
Rat 1585 -----SSEAEIQAKAQQVEAAERSR----------MRIEEEIRVVRLQLETTER---QRGGAED- 1630
Rat 1631 ------------------------------ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQ 1665
Rat 1666 RKRQAEAELALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERAR------------ 1718
Rat 1719 -QVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLRE--EAERRAQQQAEAERA 1780
Rat 1781 REEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRE 1845
Rat 1846 LAE--QELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQHEATAATQKRQ 1908
Rat 1909 ELEAELAK-----------VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAAR 1962
Rat 1963 LRALAEEAKRQRQLAEEDAARQRAEAERVLTEKLAAISEATRLKTEAEIALKEKEAENERLRRLA 2027
Rat 2028 EDEAFQRRRL---EEQAAQHKADIEERLAQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKA 2089
Rat 2090 SFEKAAAGKAELELELGRIRSNAEDTMRSKELAEQEAARQRQLAAEEEQRRR---EAEERVQRS- 2150
Rat 2151 ---LAAEEEAARQR------------------KVALEEVERLKAKVEEARRLRERA--------- 2185
Rat 2186 --------EQESARQLQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTL---QQEQNMLERLRSE 2239
Rat 2240 AEAA-RRAAEEAEEAREQAEREAAQSRKQV--EEAERLKQSAEEQAQAQAQAQAAAEKLRKEAEQ 2301
Rat 2302 EAARRAQAE------QAALKQKQAADAEMEKHKK----------FAEQTLRQKAQVEQELTTLRL 2350
Rat 2351 QLEETD------HQKSILDEEL----------------QRLKAEVTEAA-------------RQR 2380
Rat 2381 SQVEEELF------------SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQV 2433
Rat 2434 AEEAARLSV-AAQEAARLRQLAEEDLAQQRA-----------LAEKMLKEKMQAVQEATRLKAEA 2486
Rat 2487 ELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLR--MAEM 2549
Rat 2550 SRAQARAEEDA-----QRFRKQAEEIGEKLHR--TELATQEKVTLVQTLEIQRQQSDQDAERLRE 2607
Rat 2608 AIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLSEKDSLLQRERFIEQEKAK 2672
Rat 2673 LEQLFQDEVAKAKQLQEEQQRQQQQMEQEKQELVASMEEARRRQREAEEGV-------------- 2723
Rat 2724 -RRKQEELQRLEQQRQQQEKLLAEENQRLRERLQRLEEEHRAALAHSEE-IATS----QAAATKA 2782
Rat 2783 LPNGRDALDGPSMEAEPEYTFEGLRQKVPAQQLQEAGILSMEELQRLTQGHTTVAELTQREDVHR 2847
Rat 2848 YLKGGSSIAGLLLKPTNEKLSVYTALQRQLL-SPGTALILLEAQAASGFLLDPVRNRRLTVNEAV 2911
Rat 2912 KEGVVGPELHHKLLSAERAVTGYKDPYTGEQISLFQAMKKDLIVRDHGIRLLEAQIATGGIIDPV 2976
Rat 2977 HSHRVPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVE---------DP 3032
Rat 3033 ETGLRL--------LPLTDKAAKGGELVYTDTEARDVFEKATVSAPFGKFQGKTVTIWEIINSEY 3089
Rat 3090 FTAEQRRDLLRQFRTGRITVEKIIKIVITVVEEHERK--GQLCFEGLRALVPAAELLDSGVISHE 3152
Rat 3153 -VYQQLQRGERSVREVA--------EADEVRQALRGTSVIAGVW-LEEAGQKLSIYEALRR---- 3203
Rat 3204 ---DLLQPEVAVALLEAQAGTGHIIDPATSARLTVDEAVRAGLVGPEMHEKLL-SAEKAVTGYRD 3264
Rat 3265 PYSGQSVSLFQALKKGLIPREQGLRLLDAQLSTGGIVDPSKSHRVPLDVAYARGYLDKETNRALT 3329
Rat 3330 SPRDDARVYLDPSTREPVT-YSQLQQRCRSDQLTGLSLLPLSEKAVRARQEEVYSELQARETL-- 3391
Rat 3392 -EKAKVEVPVGGFKGRALTVWELISSEYFTEEQRQELLRQFRTGKVTVEKVIKILITIVEEVETQ 3455
Rat 3456 RQERLSFSGLRAPVPASELLASKILSRTQFEQLKDGKTSVKDLSEVGSVRTLLQGSGCLAGIYLE 3520
Rat 3521 DSKEKVTIYEAMRRGLLRPSTATLLLEAQAATGFLVDPVRNQRLYVHEAVKAGVVGPELHEKLL- 3584
Rat 3585 -----SAEKAVTGYKDPYSGSTISLFQAMKKGLVLRDHAIRLLEAQIA---TGGIIDPVHSHRLP 3641
Rat 3642 VDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVEDPETGLRLLPLRGAEKT 3706
Rat 3707 EVVETTQVYTEEETRRAFEETQIDIPGGGSHGGSSMSLWEVMQSDMIPEDQRARLMADFQAGRVT 3771
Rat 3772 KERMIIIIIEIIEKTEIIRQQNLASYDYVRRRLT-----AEDLYEARIISLETYNLFREGTKSLR 3831
Rat 3832 E-VLEMESAWRYLYGTGSVAGVYLPGSRQTLTIYQALK-KGLLSAEVAR---LLLEAQAATGFLL 3891
Rat 3892 DPVKGE---RLTVDEAV------RKGLVGPELHDRLLSAERAVTGYRDPYTEQPISLFQAMKKEL 3947
Rat 3948 IPAEEALRLLDAQLATGGIVDPRLGFHLPLEVAYQRGYLNKDTHDQL------SEPSEVRSY--- 4003
Rat 4004 VDPSTDERLSYTQLLKRCRRDDNSGQMLLPLSDARKLTFRGLRKQITVEELVRSQVMDEATALQL 4068
Rat 4069 QEGLTSIEEVTKNLQKF--LEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATG 4131
Rat 4132 YVIDPIKGLKL 4142 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Plec | XP_017450571.1 | None | |||
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | 55/217 (25%) | ||
sbcc | 11187..12008 | CDD:129705 | 173/890 (19%) | ||
SMC_prok_B | 11614..12442 | CDD:274008 | 194/910 (21%) | ||
SPEC | 11994..12156 | CDD:295325 | 31/169 (18%) | ||
SPEC | 12374..12564 | CDD:295325 | 62/272 (23%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 52/204 (25%) | ||
SPEC | 12703..12923 | CDD:238103 | 54/284 (19%) | ||
SPEC | 12816..13032 | CDD:295325 | 57/338 (17%) | ||
SPEC | 13196..13374 | CDD:238103 | 47/219 (21%) | ||
KASH | 13484..13540 | CDD:287506 | 7/22 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0516 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |