DRSC/TRiP Functional Genomics Resources

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Protein Alignment SETMAR and clr4

DIOPT Version :9

Sequence 1:NP_006506.3 Gene:SETMAR / 6419 HGNCID:10762 Length:684 Species:Homo sapiens
Sequence 2:NP_595186.1 Gene:clr4 / 2540825 PomBaseID:SPBC428.08c Length:490 Species:Schizosaccharomyces pombe


Alignment Length:301 Identity:101/301 - (33%)
Similarity:138/301 - (45%) Gaps:33/301 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    17 FKEKPEAPTEQLDVACGQENLPVGAWPPGAAPA-PFQYTPDHVVGPGADIDPTQITFPGCICVKT 80
            |.||.|...::|....|.|...|........|: .||:...:.:..|. |.|......||.|...
pombe   202 FYEKRELFRKKLREIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGV-IPPDPNFQSGCNCSSL 265

Human    81 -PC---LPGTCSCLRHGEN-----YDDNSCLR-DIGSGGKYAEPVFECNVLCRCSDHCRNRVVQK 135
             .|   .|..|.||...:.     ||....:| |.|:      .::|||..|.||..|.|||||:
pombe   266 GGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGA------VIYECNSFCSCSMECPNRVVQR 324

Human   136 GLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNY----IIAI 196
            |.....::|||.:||||:|:|.|.|.|.|:..|.|||:..:|..:|       |.||    |..:
pombe   325 GRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKR-------DKNYDDDGITYL 382

Human   197 REHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNL-LMIPVRIDSM--VPKLALFAAKDIVPEEEL 258
            .:........|..||....|::.||.||||.||: :...||....  :..||.||.|||.|.|||
pombe   383 FDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEEL 447

Human   259 SYDYSGRYLNLTVSEDKERLDH-GKLRKPCYCGAKSCTAFL 298
            ::||:|......|...|.:.:. .|||:.|.||:.:|..:|
pombe   448 TFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWL 488

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SETMARNP_006506.3 Histone-lysine N-methyltransferase 1..345 101/301 (34%)
Pre-SET 27..123 CDD:295400 26/106 (25%)
SET 139..268 CDD:214614 51/135 (38%)
S-adenosyl-L-methionine binding 149..151 1/1 (100%)