DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sv2b and CG33233

DIOPT Version :9

Sequence 1:NP_001103223.1 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus
Sequence 2:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster


Alignment Length:575 Identity:122/575 - (21%)
Similarity:214/575 - (37%) Gaps:130/575 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    92 AHQYETIIDECGHGRFQWTLFFVLGLALMADGVEIFVVSF--ALPSAEKDMCLSSSKKGMLGLIV 154
            |...:|.:...|:|..|..:|.|.....|....|.....:  .|.|.|.|  .|..:|.:|...:
  Fly     3 AMDVDTALLTIGYGLGQVIIFMVSFFIYMYSVTESMTAGYLVVLTSCEFD--TSPKEKTLLANSL 65

Mouse   155 YLGMMAGAFILGGLADKLGRKKVLSMSLAINASFASLSSFVQGYGAFLFCRLISGIGIGGSLPIV 219
            ..||:|....:|.|||:.|||.|:.::|....||:.:|:.:....:....|:|.|..:.....:.
  Fly    66 LGGMVASGLFIGFLADRYGRKFVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQ 130

Mouse   220 FAYFSEFLSREKRGEHLSW----LGIFWMTGG---IYASAMAWSIIPHYGWGFSMGTNYHFHSWR 277
            ..:..||       ..:.|    :.|...:.|   ||...:|.:|:|: .:...:.::|:...||
  Fly   131 VGFLGEF-------HAIKWRPITVAICSQSQGLALIYCPLVAMAILPN-NFNVDLSSSYNLRVWR 187

Mouse   278 VFVIVCALPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKVFTVSHIKT 342
            ..::...:|..:::|.:..:||:|.||:.:.:.|:|.:.||.:  ..|..|...:...|:|..|:
  Fly   188 FLMMFFMIPGWLALVGICLVPETPHFLMSVNRPDKALLALKWI--CRMNRKKWEDVDITLSEEKS 250

Mouse   343 PKQMDEFIEIQSSTGTWYQRWLVRFMTIFKQVWDNALYCVMGPYRMNTLILAVVWFTMALSYYGL 407
            .....|        |.|            |.||.........|:.....|...:.|.:..:..||
  Fly   251 STNDQE--------GFW------------KTVWYEYKLLFSKPHVFKFFICLFLIFGIFFTSIGL 295

Mouse   408 TVWFPDMIRYFQDEEYKSKMKVFFGEHVHGATINFTMENQ-IHQHGKLVNDKFIKMYFKHVLFED 471
            .:||| :||                          .|:|. .::...|||:            ..
  Fly   296 GIWFP-VIR--------------------------NMDNSGSNRLCDLVNN------------NP 321

Mouse   472 TFFDKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHKFINCRFINSTFLEQKEGCHMDFEEDNDF 536
            ||.:. ..:|...||:....|..|.|...:...|...:|.|..:.|.                  
  Fly   322 TFINH-EADDTNGTDSESPKCNDEMTNLIDPVYYGFTYIGCFILASV------------------ 367

Mouse   537 LIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLI----SAVCCFFLFFGNSESAMIGWQC 597
               ||.::....|:..:|:.:::         :|.|:.|    :.|..||:........:|.   
  Fly   368 ---LVHWMTRKYVIALHILISMI---------LGISLNIMKQPTVVLIFFVLMMVLPGVLIP--- 417

Mouse   598 LFCGTSIAAWNALDVITVELYPTNQRATAFGILNGLCKFGAILGNTIFASFVGIT 652
              ..||         :.|:..|.|.|..|..::..|.:||.:||:|:...|:.:|
  Fly   418 --LATS---------VLVDCLPVNLRGKALCMVRSLARFGGVLGSTMIGLFIRVT 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sv2bNP_001103223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
synapt_SV2 8..683 CDD:130366 122/575 (21%)
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 113/544 (21%)
MFS 23..>208 CDD:119392 44/194 (23%)
MFS 354..>482 CDD:304372 30/152 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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