DRSC/TRiP Functional Genomics Resources

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Protein Alignment MAP2K4 and PBS2

DIOPT Version :9

Sequence 1:NP_001268364.1 Gene:MAP2K4 / 6416 HGNCID:6844 Length:410 Species:Homo sapiens
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:160/439 - (36%)
Similarity:235/439 - (53%) Gaps:84/439 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     3 APSPSG--------------GGGSGGGS----------GSGTPGP---VG-SPAPGHPAVSSMQG 39
            |||||.              |..|..||          .|.|.||   || :|..|:...||..|
Yeast   246 APSPSNKKHIETLSNSKVVEGKRSNPGSLINGVQSTSTSSSTEGPHDTVGTTPRTGNSNNSSNSG 310

Human    40 FQINFCEKAQSKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQ 104
                     .|....|..||:.                     ::: :::.|:..:|||.:| .:
Yeast   311 ---------SSGGGGLFANFSK---------------------YVD-IKSGSLNFAGKLSLS-SK 343

Human   105 HWDF--------TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 161
            ..||        |.::|:.|.|:|.|.||:|:|::|||:..|||.|.:|..:||.:.:|:||:|:
Yeast   344 GIDFSNGSSSRITLDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELE 408

Human   162 VVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDV--IPEEILGKITLAT 223
             |:...:.||||.||||.|.||..::|||.| ..|.||    :|....::  |.|..|..|..|.
Yeast   409 -VLHKCNSPYIVDFYGAFFIEGAVYMCMEYMDGGSLDK----IYDESSEIGGIDEPQLAFIANAV 468

Human   224 VKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 287
            :..|..|||...|||||:||:|||.. ..|.:||||||:||.||.|:||| :.||:.|||||||.
Yeast   469 IHGLKELKEQHNIIHRDVKPTNILCSANQGTVKLCDFGVSGNLVASLAKT-NIGCQSYMAPERIK 532

Human   288 P-SASRQGYDVRSDVWSLGITLYELATGRFPYP--KWNSVFDQLTQVVKGDPPQLSNSEEREFSP 349
            . :..|..|.|:||:||||:::.|:|.||:|||  .::::|.||:.:|.|.||:|.:.   :||.
Yeast   533 SLNPDRATYTVQSDIWSLGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRLPSD---KFSS 594

Human   350 SFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQ 398
            ...:||:|||.|...:||.|..|.:||:::.|..:.|.::.|:.:.|::
Yeast   595 DAQDFVSLCLQKIPERRPTYAALTEHPWLVKYRNQDVHMSEYITERLER 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MAP2K4NP_001268364.1 PKc_MKK4 106..396 CDD:270790 130/304 (43%)
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 128/295 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48013
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2221
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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