DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMBIM1 and Nmda1

DIOPT Version :10

Sequence 1:NP_071435.2 Gene:TMBIM1 / 64114 HGNCID:23410 Length:311 Species:Homo sapiens
Sequence 2:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster


Alignment Length:338 Identity:131/338 - (38%)
Similarity:184/338 - (54%) Gaps:48/338 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSNPSAP--PPYEDRNPLY---PGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP------ 54
            ||..|.|  |.|:|.|..|   .|.||.|||       ||||...|||.  .|.|.|||      
  Fly     1 MSWQSVPQYPQYQDPNQQYNYGGGNPPQGGY-------GGYPPQGGYPP--QGPPQGYPPYAQGG 56

Human    55 -QPMPPTH---PMPMNYGPGHGY--------------DGEERAVSDSFGPGEWDDRKVRHTFIRK 101
             ||.|..:   |.|..|.|..|:              |.|.:..:.||     ||:.:|..||||
  Fly    57 AQPYPQPYGQGPPPGGYAPQPGFIQPPPSAGGYGAYDDPESQPKNFSF-----DDQSIRRGFIRK 116

Human   102 VYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNII 166
            ||.|:..||::|...:|:|.:.|....|.|.|:.:::|:..|.:||.|.:|||:..||:.|.|.|
  Fly   117 VYLILMGQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFI 181

Human   167 LLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLL 231
            .|.|||.|..|:.|..::.|..|.|::|:.|||.|.:::|||..|||.|||...|:.....:|.|
  Fly   182 FLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMVVFL 246

Human   232 VTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQLVL-GNRKHTISPEDYITGALQIYTD 295
            :.|||.    .|.....:.::||::||:.|:::|.|||||:: |..|::||||:||..||.:|.|
  Fly   247 IFGIVA----IFVKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLD 307

Human   296 IIYIFTFVLQLMG 308
            ||.||.::|.::|
  Fly   308 IINIFMYILTIIG 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMBIM1NP_071435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 17/40 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..72 11/31 (35%)
LFG_like 89..308 CDD:198410 91/219 (42%)
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 93/225 (41%)

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