DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRRC4 and kek3

DIOPT Version :10

Sequence 1:NP_071426.1 Gene:LRRC4 / 64101 HGNCID:15586 Length:653 Species:Homo sapiens
Sequence 2:NP_523575.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster


Alignment Length:685 Identity:166/685 - (24%)
Similarity:248/685 - (36%) Gaps:214/685 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    19 LPFVYLTAQVWILCAAIAAAASAGP--QNCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRY 79
            || ::|...:|:||    ..:..|.  ..||:||.|..:..|  |:|....|:.:||.:.:.|:.
  Fly    55 LP-LHLHLLLWLLC----CCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQL 114

Human    80 LNLMENNIQMIQADTF--RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGA 142
            |:|..|.||:|..|:|  ..|.:|:.:.|.|..:|.||..||..|.:|..|:|..|.|:.|||.|
  Fly   115 LDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLA 179

Human   143 FEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207
            ..::|:||||.|..|||..:|..||..||.|::|:|.:. :|.:|:..||.||.:          
  Fly   180 LYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDC-RLSHIAVRAFAGLES---------- 233

Human   208 IKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272
                       .||.|::.||...|:|.|:...|:||                            
  Fly   234 -----------SLEWLKLDGNRLSEVRSGTITSLASL---------------------------- 259

Human   273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWL-AWWLREYIPTNSTCCGRCHAPMHMR 336
              |.                  |.|..|.|||.|.:..| ||.|::.||  |.....|.:|..:.
  Fly   260 --HG------------------LELARNTWNCSCSLRPLRAWMLQQNIP--SGIPPTCESPPRLS 302

Human   337 GRYLVEVDQASFQCSAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLS------ 393
            ||...::|...|.| .|.|:......:..|||...:.|...  |..:|||||.|..:.:      
  Fly   303 GRAWDKLDVDDFAC-VPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGD 366

Human   394 -HASRHPRISVLNDG--------TLNFSHVL-----LSDTGVYTCMVTNVAGNSNASAYLNVSTA 444
             .:...||.:....|        ..|.|::.     :.|.|:|||...|.||...||        
  Fly   367 GDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVEAS-------- 423

Human   445 ELNTSNYSFFTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQVAVPAT 509
                        ||:..:...||                                .|..|.:   
  Fly   424 ------------VTLAVSRRPPE--------------------------------APWGVRI--- 441

Human   510 DTTDKMQTSLDEVMKTTKIIIGCFVAVTLL-----AAAMLIVFYKLRKRHQQRSTVTAARTVEII 569
                              |::|...|:.|:     ||..|....:.||.....|.....|:....
  Fly   442 ------------------ILLGAVAALLLVGGSSFAAICLCSLQRRRKLRLWNSVPPVRRSESYE 488

Human   570 QVDEDIPAATSAAATAAPSGVSGEGAVV---------LPTIHDHINYN-------TYKPAHGAHW 618
            :::............|:..|.|..||.:         |...|..:|.|       ...|:.|:..
  Fly   489 KIEMTARTRPDLGGGASCGGGSATGAGLFHDAEEQGYLRAAHTPLNDNDAGQAAAIVNPSAGSAQ 553

Human   619 TENSLGNSLHPTVTTISEPYIIQTHTKDKVQETQI 653
            ..|  |:.||           :.||..|:.::.|:
  Fly   554 RRN--GDYLH-----------VSTHCDDEEEDQQL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRRC4NP_071426.1 LRRNT 46..79 CDD:214470 12/34 (35%)
LRR <75..323 CDD:443914 76/250 (30%)
LRR 1 76..97 9/22 (41%)
leucine-rich repeat 77..100 CDD:275380 10/24 (42%)
LRR 2 100..121 8/20 (40%)
leucine-rich repeat 101..124 CDD:275380 9/22 (41%)
LRR 3 124..145 9/20 (45%)
leucine-rich repeat 125..148 CDD:275380 9/22 (41%)
LRR 4 148..169 11/20 (55%)
leucine-rich repeat 149..172 CDD:275380 12/22 (55%)
LRR 5 172..194 7/21 (33%)
leucine-rich repeat 173..197 CDD:275380 9/23 (39%)
LRR 6 197..218 0/20 (0%)
leucine-rich repeat 198..219 CDD:275380 0/20 (0%)
LRR 7 219..240 8/20 (40%)
leucine-rich repeat 220..243 CDD:275380 9/22 (41%)
LRR 8 243..264 2/20 (10%)
leucine-rich repeat 244..267 CDD:275380 1/22 (5%)
LRR 9 267..288 1/20 (5%)
leucine-rich repeat 268..289 CDD:275380 1/20 (5%)
LRRCT 300..351 CDD:214507 18/51 (35%)
IG_like 359..441 CDD:214653 26/103 (25%)
Ig strand B 370..374 CDD:409367 0/3 (0%)
Ig strand C 381..385 CDD:409367 2/3 (67%)
Ig strand E 407..411 CDD:409367 1/11 (9%)
Ig strand F 421..426 CDD:409367 3/4 (75%)
Ig strand G 434..437 CDD:409367 1/2 (50%)
kek3NP_523575.1 LRR <98..>267 CDD:443914 68/238 (29%)
leucine-rich repeat 112..137 CDD:275380 10/24 (42%)
leucine-rich repeat 138..161 CDD:275380 9/22 (41%)
leucine-rich repeat 162..185 CDD:275380 9/22 (41%)
leucine-rich repeat 186..209 CDD:275380 12/22 (55%)
leucine-rich repeat 210..234 CDD:275380 9/45 (20%)
leucine-rich repeat 235..258 CDD:275380 9/22 (41%)
LRRCT 267..316 CDD:214507 18/50 (36%)
Ig 331..428 CDD:472250 28/116 (24%)
Ig strand B 335..339 CDD:409562 0/3 (0%)
Ig strand C 348..352 CDD:409562 2/3 (67%)
Ig strand E 394..398 CDD:409562 1/3 (33%)
Ig strand F 408..413 CDD:409562 3/4 (75%)
Ig strand G 421..424 CDD:409562 2/22 (9%)

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