DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kit and btl

DIOPT Version :9

Sequence 1:NP_071600.1 Gene:Kit / 64030 RGDID:620568 Length:978 Species:Rattus norvegicus
Sequence 2:NP_001014583.1 Gene:btl / 39564 FlyBaseID:FBgn0285896 Length:1052 Species:Drosophila melanogaster


Alignment Length:1132 Identity:295/1132 - (26%)
Similarity:447/1132 - (39%) Gaps:328/1132 - (28%)


- Green bases have known domain annotations that are detailed below.


  Rat    41 PAQSELIVEAGDTIRLTCTDPAFVKWTFEILDVRIENKQSEWIREKAEATHTGKYTCVSGSG--L 103
            |.|..|:.:.  .|.|.|..| ..||.:|   .:.:.:.:....|:|::.::|.|.|:....  .
  Fly    40 PRQRHLLSDM--DITLQCVRP-MAKWFYE---DKFQLRATLLRLERAQSGNSGNYGCLDSQNRWY 98

  Rat   104 RSSIYVFVRDPAVLFLVGLPLFGKEDNDALVRCPLTDPQVSNYSLIECDGKSLP-TDLKFVP-NP 166
            ..|:.|..::|     ||        ||           ::::..:| |..:|| :||.|.| |.
  Fly    99 NISLVVGHKEP-----VG--------ND-----------IASFVKLE-DAPALPESDLFFQPLNE 138

  Rat   167 KAGITI-----KNVKRA----YHRLCIRCAAQREG---KWMRSDKFTLKVRAAIK---------- 209
            ...:.:     |.|:|.    :...|.......:|   .|:.:|...|..|..||          
  Fly   139 SRSLKLLQPLPKTVQRTAGGLFQLNCSPMDPDAKGVNISWLHNDTQILGGRGRIKLKRWSLTVGQ 203

  Rat   210 -------------------------AIPVVSVPETSHLLKE----------GDTFTVICTIKDV- 238
                                     .:.|:|...|..:||.          ||..::.|.::|. 
  Fly   204 LQPEDAGSYHCELCVEQDCQRSNPTQLEVISRKHTVPMLKPGYPRNTSIALGDNVSIECLLEDSA 268

  Rat   239 ------------STSVDSMWIKLNPQPQSKAQVKRNSWHQGDFNYERQETLTISSARVNDSGVFM 291
                        :.::|.:..:|..|.|....|.|.....     :..:.|.:.:..:.|.|.::
  Fly   269 LEPKITWLHKGNADNIDDLLQRLREQSQLPVDVTRLITRM-----DEPQVLRLGNVLMEDGGWYI 328

  Rat   292 CYANNTFGSANVTTTLKVVEKGFINIF-PVKNTTVFVT-------------DGENVDLVVEFEAY 342
            |.|.|..|        :.|...::::: |...|||..|             .||:.|..||   .
  Fly   329 CIAENQVG--------RTVAASYVDLYSPSDTTTVRTTTTTTVASPIPTASTGEDNDDDVE---N 382

  Rat   343 PKPEHQQWIYMNRTPTNRGE----DYVKSDNQSNIR------------------------YVNE- 378
            |..|....:   ..|..|.|    .:..|.|..|:.                        ||.: 
  Fly   383 PAAEASGGV---GPPVFRKELKRLQHSLSGNTVNLACPVYGKANITWTKDKKPLNRELGVYVQKN 444

  Rat   379 --LRLTRLKGTEGGTYTFLVSNSDVSASVTFDVYVNTK---------PEILTYDRLMNGRL--QC 430
              ||.......:.|.|...|.|:.......|.|.:|.:         |:..|..  :||.|  :|
  Fly   445 WTLRFVEATSEDSGLYNCKVCNAWGCIQFDFSVQINDRTRSAPIIVVPQNQTVK--VNGSLVMKC 507

  Rat   431 VAAGFPEPTIDWYFCTGAEQRCTVPVPPVD----VQIQNASVSPFGKLVVQSSIDSSVFRHNGTV 491
            .......||:.|       :|..:....:|    |:|||.:.:.....|| .::.:..|...|..
  Fly   508 TVYSDLHPTVSW-------KRVVLKNASLDGLKSVEIQNLNFTVTNDSVV-LTLRNVTFDQEGWY 564

  Rat   492 ECKASNAVGKSSAFFNFAFKGNSKEQIQPHTLFTPLLI---------GF------VVTAGLMG-- 539
            .|.||:.:|:|          ||...::..:...||.|         ||      :|...|:|  
  Fly   565 TCLASSGLGRS----------NSSVYLRVVSPLPPLEIYALLHAHPLGFTLAAITIVALFLLGSA 619

  Rat   540 -IIVMV--LAYKYLQKPMYEV--QW--KVV------EEINGNN-------YVYI----------- 573
             |..|:  |..:.|.|...|.  ||  ||:      ||.:|.:       .:.|           
  Fly   620 FITFMLRRLRREKLLKLRIETVHQWTKKVIIYRPGGEEGSGCSSGDLQMPVIRIEKQRTTVSTTG 684

  Rat   574 ----DPTQ------LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSD--AAMTVAVKM 626
                ||.|      .|.|..||.||.:||.|..||.||||:||.|.|.||.:|.  |...|||||
  Fly   685 TGGTDPAQGFNEYEFPLDSNWEIPRQQLSLGSILGEGAFGRVVMAEAEGLPRSPQLAETIVAVKM 749

  Rat   627 LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSF 691
            :|.....|:..:|:.|::|:..:|.|:||:||||.|:.|||..||.||..:|:|.:||::.|.  
  Fly   750 VKEEHTDTDMASLVREMEVMKMIGKHINIINLLGCCSQGGPLWVIVEYAPHGNLKDFLKQNRP-- 812

  Rat   692 IFSKQEEQADAALYKNLLHSKESSCDSSNEYMDMKPGVSYVVPTKTDKRRSARIDSYIERDVTPA 756
              ...:.::|                 |:.|:|.||.:|                       |..
  Fly   813 --GAPQRRSD-----------------SDGYLDDKPLIS-----------------------TQH 835

  Rat   757 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 821
            :.|        ::|..|::|:|:||.:|||:.||||||||||:|::.|.:.||.||||||||::.
  Fly   836 LGE--------KELTKFAFQIARGMEYLASRRCIHRDLAARNVLVSDGYVMKIADFGLARDIQDT 892

  Rat   822 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 886
            ..|....|.|||:|||||||:....|..:|||||||:.|||:.:.|..|||.:....:.|..:..
  Fly   893 EYYRKNTNGRLPIKWMAPESLQEKKYDSQSDVWSYGVLLWEIMTYGDQPYPHILSAEELYSYLIT 957

  Rat   887 GFRMLSPEHAPAAMYEVMKTCWDADPLKRPTFKQVVQLIE---KQISDSSKHIYSNLANCNPNPE 948
            |.||..|......:|.||:.||..:...||||.::|:..:   :|.|.:....|.:|:  .|..|
  Fly   958 GQRMEKPAKCSLNIYVVMRQCWHFESCARPTFAELVESFDGILQQASSNPNDAYLDLS--MPMLE 1020

  Rat   949 NPVVVDHSVRVNSVGSSTSS---TQPL 972
            .|    .|......||.|.:   |.||
  Fly  1021 TP----PSSGDEDDGSDTETFRETSPL 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KitNP_071600.1 ig 216..307 CDD:278476 20/113 (18%)
IG_like 220..309 CDD:214653 19/111 (17%)
Ig4_SCFR 313..413 CDD:143268 28/144 (19%)
Ig 428..503 CDD:299845 19/80 (24%)
PKc_like 555..929 CDD:304357 148/416 (36%)
Pkinase_Tyr 591..925 CDD:285015 130/335 (39%)
btlNP_001014583.1 IG_like 149..232 CDD:214653 11/82 (13%)
IGc2 157..215 CDD:197706 8/57 (14%)
IG 247..336 CDD:214652 16/93 (17%)
Ig 258..340 CDD:143165 15/94 (16%)
I-set 394..479 CDD:254352 16/84 (19%)
IGc2 408..469 CDD:197706 11/60 (18%)
IG_like 492..583 CDD:214653 26/110 (24%)
Ig 507..583 CDD:299845 21/93 (23%)
PKc_like 700..1000 CDD:304357 136/351 (39%)
TyrKc 712..996 CDD:197581 130/335 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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