DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1G and myo1e.1

DIOPT Version :9

Sequence 1:NP_149043.2 Gene:MYO1G / 64005 HGNCID:13880 Length:1018 Species:Homo sapiens
Sequence 2:NP_001121497.2 Gene:myo1e.1 / 100158599 XenbaseID:XB-GENE-1005591 Length:1108 Species:Xenopus tropicalis


Alignment Length:1052 Identity:352/1052 - (33%)
Similarity:521/1052 - (49%) Gaps:203/1052 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    10 GKPDFVLLDQVTMEDFMRNLQLRFEKGRIYTYIGEVLVSVNPYQELPLYGPEAIARYQGRELYER 74
            |..|.|||.::|.:..:.||:.|:....|:||||.||:||||::::|.:|.:.|..|||...||.
 Frog    20 GVDDMVLLSKITEDSIVDNLKKRYMDDFIFTYIGPVLISVNPFKQMPYFGDKEIEMYQGAAQYEN 84

Human    75 PPHLYAVANAAYKAMKHRSRDTCIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVERVKDVLL 139
            |||:||:|:..|:.|.....:.|::||||||||||.|:|:||.||:.|:....:  |:.|||::|
 Frog    85 PPHIYALADNMYRNMIIDRENQCVIISGESGAGKTVAAKYIMSYISKVSGGGPK--VQHVKDIIL 147

Human   140 KSTCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPIGGHIHSYLLEKSRVLKQHVGERNFHAF 204
            :|..:|||||||:|.||:||||||||.:|.|...|:|.||.|.::|||||||:.::.|||:||.|
 Frog   148 QSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSPGGEPDGGKISNFLLEKSRVVMRNPGERSFHIF 212

Human   205 YQLLRGSEDKQLHELHLERNPAVYNFTHQGAGLNMTVHSALD-SDEQSHQAVTEAMRVIGFSPEE 268
            |||:.|:...|...|.: .:...||:.:|.....:.     | :|::..|....||.|||.|.|.
 Frog   213 YQLIEGASKDQRESLGI-TSLDYYNYLNQSGSYKVD-----DINDKRDFQETMHAMNVIGISAEG 271

Human   269 VESVHRILAAILHLGNIEFVETEEGGLQKEGLAVAEEALVDHVAELTATPRDLVLRSLLARTVAS 333
            ...|.:|:|.:||||||.|  .|:|..    .||..|..:...|.|....:..:...|.:|.:.|
 Frog   272 QAMVMQIVAGVLHLGNIGF--KEKGNY----AAVENEEFLAFPAFLLGINQSRLKDKLTSRQMDS 330

Human   334 --GGR-ELIEKGHTAAEASYARDACAKAVYQRLFEWVVNRINSVMEPRGRDPRRDGKDTVIGVLD 395
              ||: |.|.......:|.|.|||.:||::.|:|:::|:.||..|       ::|.::..|||||
 Frog   331 KWGGKSESINVTLNVEQACYTRDALSKALHSRVFDYLVDSINKAM-------KKDHEEYNIGVLD 388

Human   396 IYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGITWQSVEYFNNATIVDLVERP 460
            |||||:|..|.|||||||:.||||||:||:|.||.|||||.:|||.|..:|||||..:.||:|..
 Frog   389 IYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYFNNKIVCDLIENK 453

Human   461 HR--GILAVLDEACS---SAGTITDRIFLQTLDMHHRHHLHYTSRQLCPTDKTMEFGRDFRIKHY 520
            ..  |::::||:.|:   :.|...|:..||.|.|....|.|:.|           :.:.|.|.||
 Frog   454 VNPPGVMSILDDVCATMHAVGEGADQTLLQKLQMAVGTHEHFNS-----------WNQGFIIHHY 507

Human   521 AGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAMWPDGQQDITEVTKRPLTAGTLFKNSMV 585
            ||.|:|.|:||.::|||.||.|...|:.:|..|.::|::|:..|  .|...||.|||:..|....
 Frog   508 AGKVSYDVDGFCERNRDVLFMDLIELMQSSQQPFMQALFPENLQ--AEKKGRPTTAGSKIKKQAN 570

Human   586 ALVENLASKEPFYVRCIKPNEDKVAGKLDENHCRHQVAYLGLLENVRVRRAGFASRQPYSRFLLR 650
            .||..|....|.|:|||||||.|.....:|:..:|||.||||.||:||||||:|.|:.:.:||.|
 Frog   571 DLVNTLMKCTPHYIRCIKPNETKKPRDWEESRVKHQVEYLGLKENIRVRRAGYAYRRVFKKFLQR 635

Human   651 YKMTCEYTWPNHLLGSDKAAVSALLEQHGLQGD-VAFGHSKLFIRSPRTLVTLEQSRARLIPIIV 714
            |.:..:.|||: ..|.:|..|..||....:..| ...|.:|:||::|.:|..||:.|.|......
 Frog   636 YAILTKETWPS-WKGDEKKGVLHLLHSVNMDSDQFQLGKTKIFIKAPESLFLLEEMRERKYDGYA 699

Human   715 LLLQKAWRGTLARWRCRRLRAIYTIMRWFRRHKVRAHLAELQRRFQAARQPPLYGRDLVWPLPPA 779
            ..:|||||..:||.:                        .:|.|.||:                 
 Frog   700 RSIQKAWRKYVARKK------------------------YVQMREQAS----------------- 723

Human   780 VLQPFQDTCHALFCRWRARQLVKNIPPSDMPQIKAKVAAMGALQGLRQDWGCRRAWARDYLSSAT 844
                      .||...:.|:  :|                          ...|.:..||: ...
 Frog   724 ----------DLFLNKKERR--RN--------------------------SINRNFIGDYI-GMD 749

Human   845 DNPTASSLFAQRLKTLQDKDGFGAVLFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQYR--- 906
            :.|.......:|.|          :.|:..|.|.:|..|...|.|:||.:.:|.:..|:..:   
 Frog   750 ERPELRQFVGKREK----------IDFADTVTKYDRRSKGVKRDLILTPKSVYLIGRDKMKQGPE 804

Human   907 -------VMRAVPLEAVTGLSVTSGGDQLVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAAH 964
                   :.:.:.:|.:..:|:::..|...:||.:..|.|:..|.::         |.:.:|:.|
 Frog   805 KGLVKEVLKKKIDVERILSVSLSTMQDDFFILHEQEYDSLLESLFKT---------EFISLLSKH 860

Human   965 ----------------------------------------CQGEG---------RTLEVRVSDCI 980
                                                    .||.|         :.|:|.:...:
 Frog   861 YEEKTQRKLPLKFNNILDMKLKKENWGPWSGGAGSRQVQFIQGFGDLAVLKHSSKVLQVSIGQGL 925

Human   981 PLSHRGVRRLIS 992
            |.:.|..||.|:
 Frog   926 PKNSRPTRRNIT 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1GNP_149043.2 MYSc 4..706 CDD:214580 297/705 (42%)
MYSc_Myo1 23..694 CDD:276829 286/680 (42%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 584..606 10/21 (48%)
Myosin_TH1 815..980 CDD:283635 33/223 (15%)
myo1e.1NP_001121497.2 MYSc_Myo1 33..679 CDD:276829 286/680 (42%)
Myosin_TH1 719..921 CDD:368706 40/276 (14%)
SH3_MyoIe_If_like 1055..1107 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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