DRSC/TRiP Functional Genomics Resources

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Protein Alignment FIGNL1 and Fignl1

DIOPT Version :10

Sequence 1:NP_071399.2 Gene:FIGNL1 / 63979 HGNCID:13286 Length:674 Species:Homo sapiens
Sequence 2:NP_001011913.1 Gene:Fignl1 / 289777 RGDID:1307112 Length:677 Species:Rattus norvegicus


Alignment Length:678 Identity:532/678 - (78%)
Similarity:583/678 - (85%) Gaps:5/678 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQTSSSRSVHLSEWQKNYFAITSGICT-GPKADAYRAQILRIQYAWANSEISQVCATKLFKKYAE 64
            |:|||||||.:.:|||||..:.|.||| ..|||||||.:|.||.|:||||||||.||.|||:|.|
  Rat     1 METSSSRSVQVDDWQKNYSVVASSICTPKQKADAYRALLLHIQDAYANSEISQVFATNLFKRYTE 65

Human    65 KYSAIIDSDNVESGLNNYAENILTLAGSQQTDSDKWQSGLSINNVFKMSSVQKMMQAGKKFKDSL 129
            |||||||||||.:|||||||:|..||||||.||||||||||||||||||:||:|||||:|||:||
  Rat    66 KYSAIIDSDNVVTGLNNYAESIFALAGSQQADSDKWQSGLSINNVFKMSTVQEMMQAGQKFKESL 130

Human   130 LEPALASVVIHKEATVFDLPKFSVCGSSQESDSLPNSAHDRDRTQDFP-ESNRLKLLQNAQPPMV 193
            ||||.||||:.||.|:|::|:..|||.|:|:|.|.:|.|..::||..| .|.|....|:...||.
  Rat   131 LEPADASVVMCKEPTIFEVPQLGVCGGSEEADLLSSSVHGTEKTQAIPGNSLRCSPFQSTLFPMA 195

Human   194 TNTARTCPTFSAPVGESATAKFHVTPLFGNVKKENHSSAKENIGLNVFLSNQSCFPAACENP-QR 257
            ||| :||.|.|||.|||.||.||.||||||.|||..|..|.:.|||:||||.||.|:.|||| :|
  Rat   196 TNT-KTCLTSSAPSGESTTATFHRTPLFGNTKKEPQSFPKTSTGLNMFLSNPSCVPSGCENPRER 259

Human   258 KSFYGSGTIDALSNPILNKACSKTEDNGPKEDSSLPTFKTAKEQLWVDQQKKYHQPQRASGSSYG 322
            |:|..|.||:.||||.||||.|||||:|.:||:|||||||||||||.||:|:.||.|..|.|..|
  Rat   260 KAFNDSDTINMLSNPTLNKAPSKTEDSGQREDNSLPTFKTAKEQLWADQKKRSHQSQHTSKSFNG 324

Human   323 GVKKSLGASRSRGILGKFVPPIP-KQDGGEQNGGMQCKPYGAGPTEPAHPVDERLKNLEPKMIEL 386
            .:||||||.|||||.||||||:. ||||.||||.::.|...||..||||..|:||||:||:|:||
  Rat   325 AIKKSLGAGRSRGIFGKFVPPVSNKQDGSEQNGNVKPKSSRAGSAEPAHLTDDRLKNVEPRMVEL 389

Human   387 IMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIG 451
            ||||||||||||:||||||||||||||||||||||:|||||||||||||||||||||||||||||
  Rat   390 IMNEIMDHGPPVHWEDIAGVEFAKATIKEIVVWPMMRPDIFTGLRGPPKGILLFGPPGTGKTLIG 454

Human   452 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHES 516
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   455 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHES 519

Human   517 SRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLM 581
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||
  Rat   520 SRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVNLM 584

Human   582 SKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIAYIDFEN 646
            |||||||::||.|.:|||||.|||||||||||||||||||||.|||||||:||||||||||||||
  Rat   585 SKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIRSLHTADIATISPDQVRPIAYIDFEN 649

Human   647 AFRTVRPSVSPKDLELYENWNKTFGCGK 674
            ||||||||||||||||||||||||||||
  Rat   650 AFRTVRPSVSPKDLELYENWNKTFGCGK 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIGNL1NP_071399.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..179 9/22 (41%)
Necessary and sufficient for interaction with RAD51. /evidence=ECO:0000305|PubMed:23754376 295..344 34/48 (71%)
RecA-like_Figl-1 380..565 CDD:410933 180/184 (98%)
AAA_lid_3 590..>621 CDD:465537 25/30 (83%)
Vps4_C <631..671 CDD:462762 38/39 (97%)
Fignl1NP_001011913.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..232 20/28 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..324 48/74 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..378 24/40 (60%)
RecA-like_Figl-1 383..568 CDD:410933 180/184 (98%)
AAA_lid_3 593..>624 CDD:465537 25/30 (83%)
Vps4_C <634..674 CDD:462762 38/39 (97%)

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