DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube4b and CG2218

DIOPT Version :10

Sequence 1:NP_001391798.1 Gene:Ube4b / 63958 MGIID:1927086 Length:1465 Species:Mus musculus
Sequence 2:NP_651790.1 Gene:CG2218 / 43611 FlyBaseID:FBgn0039767 Length:486 Species:Drosophila melanogaster


Alignment Length:323 Identity:70/323 - (21%)
Similarity:115/323 - (35%) Gaps:117/323 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse  1160 STIFK------SLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEM 1218
            ||.|:      .:|:.:|              |||.:...::..||..                 
  Fly    79 STAFELHGRHDGIWERVA--------------FVRDLGRGVDSVTFCY----------------- 112

Mouse  1219 KNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAM 1283
                |.|...|....:.||:.....:.:...|| :|.:|.:....|::. .|.||.         
  Fly   113 ----QSDYNSRSSSNSEQSEKVFFFKSAHKILA-STNSVKVVIRATERC-PPVLRK--------- 162

Mouse  1284 LNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEE 1348
                 .|:.|...|.|...:.|..    |.:..:::|.|.|.|.|:    ....|||..:.    
  Fly   163 -----VQMWGLPARSLDKADRELV----KTIWSEISDPYGQRDAAQ----TPTGQRSPPRN---- 210

Mouse  1349 VISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSG 1413
             :.::|.   :||::|                           |:||.|.:...||..|..||||
  Fly   211 -VPELRD---QSTLSI---------------------------PEEFLDSITWELMIFPTVLPSG 244

Mouse  1414 TVMDRSIILRHLL------NSPTDP-----FNRQMLTESMLEPVPELKEQIQAWMREKQSSDH 1465
            .|:|:|.|.:|..      ..|:||     ||.|  .:::|...  ||.:|:.::.|  :|:|
  Fly   245 KVVDQSTIDKHAEEEAKWGRQPSDPFTGLEFNAQ--RKAILHLA--LKARIEKFLME--NSEH 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube4bNP_001391798.1 PHA03247 <296..521 CDD:223021
Ufd2P_core 754..1374 CDD:463080 41/219 (19%)
RING-Ubox_UBE4B 1388..1461 CDD:438320 27/83 (33%)
CG2218NP_651790.1 DUF5918 6..187 CDD:466039 29/162 (18%)
RING-Ubox_RNF37 223..275 CDD:438322 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.

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