DRSC/TRiP Functional Genomics Resources

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Protein Alignment VIPAS39 and vipas39

DIOPT Version :10

Sequence 1:NP_071350.2 Gene:VIPAS39 / 63894 HGNCID:20347 Length:493 Species:Homo sapiens
Sequence 2:NP_001001836.1 Gene:vipas39 / 415096 ZFINID:ZDB-GENE-040520-1 Length:483 Species:Danio rerio


Alignment Length:494 Identity:316/494 - (63%)
Similarity:406/494 - (82%) Gaps:12/494 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNRTKGDEEEYWNSSKFKAFTFDDEDDELSQLKESKRAVNSLRDFVDDDDD-DDLERVSWSGEPV 64
            |.|.|.:::|||||||||||||||||||.|:||||||||||:  .|||||| ||:|:||||||||
Zfish     1 MTRAKPEDDEYWNSSKFKAFTFDDEDDEFSRLKESKRAVNSI--LVDDDDDEDDVEKVSWSGEPV 63

Human    65 GSISWSIRETAGNSGSTHEGREQLKSRNSFSSYAQLPKPTSTYSLSSFFRGRTRPGSFQSLSDAL 129
            ||||||:||||   .|...|.||  :.....:...|.|..|.|||||.|:.:::|.:|||.|::.
Zfish    64 GSISWSVRETA---SSIRSGSEQ--NFPKIDTAPSLSKQGSGYSLSSLFKAKSKPTAFQSFSESF 123

Human   130 SDTPAKSYAPELGRPKGEYRDYSNDWSPSDTVRRLRKGKVCSLERFRSLQDKLQLLEEAVSMHDG 194
            |:|.|::|||||.:||.:.:|:.:|.||.:|:||::||:..|:|:||||||||.||:||||::||
Zfish   124 SETSARTYAPELRKPKSDGKDFVSDLSPEETIRRMQKGRAFSMEKFRSLQDKLLLLDEAVSVYDG 188

Human   195 NVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLLDLFRFLDRTEELALSHYR 259
            ||||||||:||::||||||||||..|.|||||.||:|||:|:||||::|.:.|.|||::||..|:
Zfish   189 NVITAVLIYLKKSLSKEILFRELMPRDVALRHYIHYLKEMGEQKLLVELLKALGRTEDMALMQYK 253

Human   260 EHLNIQDPDKRKEFLKTCVGLPFSAEDSAHIQDHYTLLERQIIIEANDRHLESAGQTEIFRKHPR 324
            |||||:|..:|::|||:|:.||||.:||.|:|||||||||||||||:|:..:    |:||:|.||
Zfish   254 EHLNIKDEGRRRDFLKSCLSLPFSQDDSTHVQDHYTLLERQIIIEASDKKAD----TDIFKKFPR 314

Human   325 KASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWNDVDAL 389
            ||||||||::|||:|||||||.|.|||||||.|::|||:|.:|||:.|||.|||||::|.|||:|
Zfish   315 KASILNMPIITTLYYSCFYHYGEPEGTFSSPSNIRKTFRISEKQYITTALGARAKLKSWFDVDSL 379

Human   390 FTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTKLNLATKFKCHDVVIDTY 454
            |.|||||||||||:||.|||||:||.||:||||:|||||||::|.:.||::|.|:||||::|:||
Zfish   380 FNTKNWLGYTKKRSPIAFHRVVDILQKNSAPVQVLQEYVNLIDDPELKLSVALKYKCHDIIINTY 444

Human   455 RDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
            |||||||||:.||.|:::.|.|..||..||::.||||||
Zfish   445 RDLKDRQQLIVYREKLERDSPEYRKIQELLNNGQIRWKN 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VIPAS39NP_071350.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..99 11/30 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..152 14/28 (50%)
vipas39NP_001001836.1 None

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