DRSC/TRiP Functional Genomics Resources

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Protein Alignment VIPAS39 and spe-39

DIOPT Version :10

Sequence 1:NP_071350.2 Gene:VIPAS39 / 63894 HGNCID:20347 Length:493 Species:Homo sapiens
Sequence 2:NP_504718.1 Gene:spe-39 / 179071 WormBaseID:WBGene00004975 Length:522 Species:Caenorhabditis elegans


Alignment Length:534 Identity:120/534 - (22%)
Similarity:225/534 - (42%) Gaps:73/534 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     8 EEEYWNSSKFKAF-TFDDEDDELSQLKESKRAVNSLRDFVDDDDDDDLERVSWSGEPVGSISWSI 71
            |:.|||.|...:. .|||..   |:..:::.||::|  |..|:......|..   .|.       
 Worm    13 EDSYWNESDSNSSGLFDDLQ---SKQLQARAAVDNL--FGGDETPKPYVRPQ---NPT------- 62

Human    72 RETAGNSGSTHEGR-----EQLKSRNSFSSYAQLPKPTSTYSLSSFFRGRTRPGSFQSLSDALSD 131
             .|..|.....:||     ::...|.:.:|.....|....:....|..........|:....:|:
 Worm    63 -PTPTNVPLQIDGRAAAVSDKANIRITDTSPRASGKIVDDFLNMKFAENVNVAPVIQTAPSVVSE 126

Human   132 TPAKSYAPE-------LGRPKGEYRDYSND--------WSP---SDTVRRLRKGKVCSLERFRSL 178
            ..|.|...|       ..|.:.|:|...:.        :.|   ..:::|:.:|...:|:.:|||
 Worm   127 ASASSLPSEAQRLDLDYNRLRQEHRKLKDQHEVLRHERFQPLTIEASIKRMLQGHTVTLDYYRSL 191

Human   179 QDKLQLLEEAVSMHDGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLLDL 243
            :||.|||::||:.:|.|.|..::|||:|||.:.|..:.::.::.|.|.....|:..|:...:...
 Worm   192 RDKTQLLKQAVATYDNNTIFKIVIFLERTLKENIFCKIMDGQKSACRVYTRHLQITGEWDKMNKF 256

Human   244 FRFLDRTEELALSHY---REHLNIQDPDKRKEFLKTCVGLPFSAEDSAHIQDHYTLLERQIIIEA 305
            .|.:.:.:..::..:   |::.  ::||||...|:|.:...||..:..........|.|...|:.
 Worm   257 LRSIGQYQHASVIEFEATRKYK--RNPDKRVPLLRTMLHGSFSIPEMKFEARQMEALMRNYEIQL 319

Human   306 NDRHLESAGQTEIFRKHPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYV 370
            ....:::..:.|.|||.|:.:|::.:|.:::|:||..|||.::..:.:|..:::...:..|:...
 Worm   320 QMEKMDAGDKGEHFRKFPKTSSLIGLPALSSLYYSAMYHYDDSPTSAASLPSVQTLIRFNDRLAT 384

Human   371 LTALAARAKLRAWNDVDALF--------------------TTKNWLGYTKKRAPIGFHRVVEILH 415
            .|.::|..:|..|.|:|.|.                    :|..|      ...|..|.::.|:.
 Worm   385 QTIVSALTRLSRWPDIDKLLQPKTITMTFSAAKSVFKGKKSTSKW------GVSINNHNLLTIVK 443

Human   416 KN--NAPVQILQEYVNLVEDVDTKLNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEE 478
            ::  :.|...:...:....|...:|.||..|...::||:......||..|.:|...:...|.|..
 Worm   444 RSHPSPPTDFIYRILKGESDAQERLRLALLFDVPEMVIECLTQKGDRLSLASYAKSLKTNSVESF 508

Human   479 KIDALLSSSQIRWK 492
            |..|.|::..|:||
 Worm   509 KAVAALNNPSIKWK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VIPAS39NP_071350.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..99 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..152 8/35 (23%)
spe-39NP_504718.1 None

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