DRSC/TRiP Functional Genomics Resources

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Protein Alignment VIPAS39 and vipas39

DIOPT Version :10

Sequence 1:NP_071350.2 Gene:VIPAS39 / 63894 HGNCID:20347 Length:493 Species:Homo sapiens
Sequence 2:NP_001120552.1 Gene:vipas39 / 100145706 XenbaseID:XB-GENE-992239 Length:494 Species:Xenopus tropicalis


Alignment Length:497 Identity:354/497 - (71%)
Similarity:427/497 - (85%) Gaps:7/497 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNRTKGDEEEYWNSSKFKAFTF-DDEDDELSQLKESKRAVNSLRDFVDDDDDDDLERVSWSGEPV 64
            |:|||||||:||:|||||||.| ||:||||||||||||||||||..||:|||.  |.|:||||||
 Frog     1 MSRTKGDEEDYWHSSKFKAFAFDDDDDDELSQLKESKRAVNSLRAIVDEDDDG--ETVNWSGEPV 63

Human    65 GSISWSIRETAGNSGSTHEGRE--QLKSRNSFSSYAQLPKPTSTYSLSSFFRGRTRPGSFQSLSD 127
            |||||||:|||.|:.::.|.|.  ..|||...|| :..|||.|::||||.|||.::..|.|||||
 Frog    64 GSISWSIKETASNARASAETRNFAPHKSRTEASS-SVFPKPGSSHSLSSLFRGWSQTESRQSLSD 127

Human   128 ALSDTPAKSYAPELGRPKGEYRDYSNDWSPSDTVRRLRKGKVCSLERFRSLQDKLQLLEEAVSMH 192
            ||.||.:|.:||||.||:.|.:|||.|||..:|:||:::||:|.|||||:|::||.||:|||.:|
 Frog   128 ALLDTNSKIFAPELRRPRSENQDYSGDWSVEETIRRMQRGKICPLERFRTLKEKLHLLDEAVKLH 192

Human   193 DGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLLDLFRFLDRTEELALSH 257
            |||||||||||||:||:.::||:|||:|||||||.||||:|:.:|:||:||.|:|:|||||||..
 Frog   193 DGNVITAVLIFLKKTLNSDVLFKELELRQVALRHFIHFLREMSEQQLLMDLLRYLERTEELALCK 257

Human   258 YREHLNIQDPDKRKEFLKT-CVGLPFSAEDSAHIQDHYTLLERQIIIEANDRHLESAGQTEIFRK 321
            |||||||...|:|::|||: |:.||||.|||||:||||||||||||:||||:|||:.||.::|||
 Frog   258 YREHLNIAGADERRDFLKSKCLSLPFSPEDSAHVQDHYTLLERQIIVEANDKHLEATGQEQMFRK 322

Human   322 HPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWNDV 386
            ||||||:|.|||||||||:|.|||||.|||||||.||:||||||:|.|:|||||||||||||:||
 Frog   323 HPRKASLLFMPLVTTLFYACIYHYTEGEGTFSSPTNLRKTFKIPEKLYILTALAARAKLRAWHDV 387

Human   387 DALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTKLNLATKFKCHDVVI 451
            ||||||||||||||||||:||||||||||||||||:||||||.||||.:::::|.||:|||||||
 Frog   388 DALFTTKNWLGYTKKRAPVGFHRVVEILHKNNAPVEILQEYVRLVEDTESRISLGTKYKCHDVVI 452

Human   452 DTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
            ||||||||||||:.||.||::.|.||.|||.:||:.||||||
 Frog   453 DTYRDLKDRQQLMVYRCKVERSSPEEIKIDNILSNMQIRWKN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VIPAS39NP_071350.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..99 15/32 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..152 18/28 (64%)
vipas39NP_001120552.1 None

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