DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SDHA and Sdha

DIOPT Version :10

Sequence 1:XP_011512374.1 Gene:SDHA / 6389 HGNCID:10680 Length:680 Species:Homo sapiens
Sequence 2:NP_075770.1 Gene:Sdha / 66945 MGIID:1914195 Length:664 Species:Mus musculus


Alignment Length:638 Identity:603/638 - (94%)
Similarity:617/638 - (96%) Gaps:0/638 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDHEFDAV 65
            |:||..:||||..|||||..|||..||..|.||||:|..||:|||||||:||.||||||||||||
Mouse     1 MAGVGAVSRLLRGRRLALTGAWPGTLQKQTCGFHFSVGENKKASAKVSDAISTQYPVVDHEFDAV 65

Human    66 VVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGS 130
            ||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||
Mouse    66 VVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGS 130

Human   131 DWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADR 195
            ||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 DWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADR 195

Human   196 TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYG 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||
Mouse   196 TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVIATGGYG 260

Human   261 RTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGER 325
            |||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||
Mouse   261 RTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGER 325

Human   326 FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIF 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIF 390

Human   391 AGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGAN 455
            ||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||
Mouse   391 AGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGAN 455

Human   456 SLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQ 520
            ||||||||||||||||.||||||||||.||.|||||||||||||||||||||||||||:||||||
Mouse   456 SLLDLVVFGRACALSIAESCRPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQ 520

Human   521 NHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEAR 585
            ||||||||||||||||.|||:||||||||||||||||||||||||||||||||||||||||||||
Mouse   521 NHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEAR 585

Human   586 KESRGAHAREDYKVRIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKCT 638
            |||||||||||||||:|||||||||||||||||.||||||||||||:.|||.|
Mouse   586 KESRGAHAREDYKVRVDEYDYSKPIQGQQKKPFGEHWRKHTLSYVDIKTGKVT 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDHAXP_011512374.1 FAD_binding_2 40..636 CDD:481218 577/595 (97%)
SdhaNP_075770.1 PTZ00139 35..664 CDD:240286 582/604 (96%)

Return to query results.
Submit another query.