| Sequence 1: | XP_005265428.1 | Gene: | SCN10A / 6336 | HGNCID: | 10582 | Length: | 1959 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001262653.1 | Gene: | Irc / 42049 | FlyBaseID: | FBgn0038465 | Length: | 697 | Species: | Drosophila melanogaster |
| Alignment Length: | 782 | Identity: | 143/782 - (18%) |
|---|---|---|---|
| Similarity: | 231/782 - (29%) | Gaps: | 304/782 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Human 443 TSLHSHN----------GSPLTSKNASERRHRIKPRV-SEGSTEDNKSPRSDPYNQRRMSFLGLA 496
Human 497 SGKRRASHGSVFHFRSPGRDISLPEGVTDDGVFPGDHESHRGSLLLGGGAGQQGPLPRSPLPQPS 561
Human 562 NPDSRHGEDE------------------HQPPPTS---ELAPGAVDVSA-------FDAGQKKTF 598
Human 599 LSAEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLSQKYLIWDCCPMWVKLKTILFG 663
Human 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIAFDPYYYF 728
Human 729 QKKWNIFDCI-----IVTVSLLELGVAKK-----GSLSVLRSF-------RLLRVFK--LAKSWP 774
Human 775 T---LNTLIKIIGNSVG-------ALGNLTIILA-----------IIVFVFALVGKQLLGENYRN 818
Human 819 NRKNISAPHEDWPRWHMHDFFHSFL-----IVFRILCGEWIENMWACMEVGQK------------ 866
Human 867 --------SICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPEDDGEVNNLQVALARIQVF 923
Human 924 GHRTKQALCSFFSRSCPFPQPKAEPELVV--KLPLSSSKAENHIAA----NTAR---GSSGGLQA 979
Human 980 PRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGGEDAQSFQQEVIPKGQQEQLQQVERCGD 1044
Human 1045 HLTPRSPGTGTSSEDLAPSLGETWKD-----ESVPQVPAEGVDDTSSSEGSTVDCLDPEEILRKI 1104
Human 1105 PE 1106 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SCN10A | XP_005265428.1 | Ion_trans | 150..410 | CDD:278921 | |
| Na_trans_cytopl | 466..>537 | CDD:288761 | 13/71 (18%) | ||
| Ion_trans | 685..897 | CDD:278921 | 49/276 (18%) | ||
| Na_trans_assoc | 907..1150 | CDD:284034 | 37/214 (17%) | ||
| Ion_trans | 1172..1430 | CDD:278921 | |||
| Na_channel_gate | 1422..1474 | CDD:240441 | |||
| Ion_trans | 1496..1735 | CDD:278921 | |||
| GPHH | 1745..1802 | CDD:293510 | |||
| Irc | NP_001262653.1 | An_peroxidase | 151..672 | CDD:281139 | 111/641 (17%) |
| An_peroxidase_like | 290..637 | CDD:265428 | 79/423 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 1 | 0.950 | - | 0.78878 | Normalized mean entropy | S3904 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.950 | |||||