DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCN9A and egl-19

DIOPT Version :9

Sequence 1:NP_001352465.1 Gene:SCN9A / 6335 HGNCID:10597 Length:1988 Species:Homo sapiens
Sequence 2:NP_001023079.1 Gene:egl-19 / 177513 WormBaseID:WBGene00001187 Length:1877 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCN9ANP_001352465.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..55
I. /evidence=ECO:0000305 112..410
Ion_trans 125..410 CDD:306908
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..543
Na_trans_cytopl 488..681 CDD:314757
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..611
II. /evidence=ECO:0000305 726..989
Ion_trans 743..956 CDD:306908
Na_trans_assoc 982..1187 CDD:310839
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1102..1148
III. /evidence=ECO:0000305 1180..1488
Ion_trans 1191..1466 CDD:306908
Na_channel_gate 1458..1510 CDD:240441
IV. /evidence=ECO:0000305 1497..1795
Ion_trans 1514..1770 CDD:306908
GPHH 1774..1837 CDD:318993
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1934..1988
egl-19NP_001023079.1 Ion_trans 105..379 CDD:278921
Ion_trans 493..714 CDD:278921
Ion_trans 815..1074 CDD:278921
Ion_trans 1134..1376 CDD:278921
GPHH 1384..1447 CDD:293510
Ca_chan_IQ 1449..1521 CDD:285917
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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