Sequence 1: | NP_002967.2 | Gene: | SCN7A / 6332 | HGNCID: | 10594 | Length: | 1682 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001038360.2 | Gene: | scn1lab / 559447 | ZFINID: | ZDB-GENE-060906-1 | Length: | 1996 | Species: | Danio rerio |
Alignment Length: | 1953 | Identity: | 891/1953 - (45%) |
---|---|---|---|
Similarity: | 1193/1953 - (61%) | Gaps: | 285/1953 - (14%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MLASPEPKGLVPFTKESFELIKQHIA---------KTHNEDHEEEDLKPTPDLEVGKKLPFIYGN 56
Human 57 LSQGMVSEPLEDVDPYYYKKKNTFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQ 121
Human 122 LFILISVLIDCVFMSLTNLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFS 186
Human 187 VTVFEVIIRYSPLDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIF 251
Human 252 SLIGMGLFMGNLKHKCFRWPQEN--ENET-----LHNRTGN-PYYIRETENFYYLEGERYALLCG 308
Human 309 NRTDAGQCPEGYVCVKAGINPDQGFTNFDSFGWALFALFRLMAQDYPEVLYHQILYASGKVYMIF 373
Human 374 FVVVSFLFSFYMASLFLGILAMAYEEEKQRVGEISKKIEPKFQ---------------------Q 417
Human 418 TGKELQEGNETDE------------AKTIQIEMKKR----------------------------- 441
Human 442 ----------------------------------------------------------------- 441
Human 442 -----------------------------------------------------------SPI--- 444
Human 445 ---STDTSLDV-------------LEDATLRHK------------EELEKSKKICPLYWYKFAKT 481
Human 482 FLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNTLLNIGNLVFIG 546
Human 547 IFTAEMIFKIIAMHPYGYFQVGWNIFDSMIVFHGLIELCLANVAGMALLRLFRMLRIFKLGKYWP 611
Human 612 TFQILMWSLSNSWVALKDLVLLLFTFIFFSAAFGMKLFGKNYEEFVCHIDKDCQLPRWHMHDFFH 676
Human 677 SFLNVFRILCGEWVETLWDCMEVAGQSWCIPFYLMVILIGNLLVLYLFLA-LVSSFSSCKDVTAE 740
Human 741 ENNEAKNLQLAVARIKKGINYV------LLKILCKTQNVPKD-----TMDHVNEVYVKEDISDHT 794
Human 795 LSELSNTQDFLKD--KEKSSGTEKNA----TENESQSLIPSPSVSETVPIASGESDIENLDNKEI 853
Human 854 QSKSGD-GGSKEKIKQS---SSSECSTVDIAISEEEEMFYGGERSKHLK------------NGCR 902
Human 903 RGSSLGQISGASKKGKIWQNIRKTCCKIVENNWFKCFIGLVTLLSTGTLAFEDIYMDQRKTIKIL 967
Human 968 LEYADMIFTYIFILEMLLKWMAYGFKAYFSNGWYRLDFVVVIVFCLSLIGKT-----REELKPLI 1027
Human 1028 SMKFLRPLRVLSQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGVDLFAGRFYECIDPTS 1092
Human 1093 GERFPSSEVMNKSRCESLL-FNESMLWENAKMNFDNVGNGFLSLLQVATFNGWITIMNSAIDSVA 1156
Human 1157 VNIQPHFEVNIYMYCYFINFIIFGVFLPLSMLITVIIDNFNKHKIKLGGSNIFITVKQRKQYRRL 1221
Human 1222 KKLMYEDSQRPVPRPLNKLQGFIFDVVTSQAFNVIVMVLICFQAIAMMIDTDVQSLQMSIALYWI 1286
Human 1287 NSIFVMLYTMECILKLIAFRCFYFTIAWNIFDFMVVIFSITGLCLPMTVGSYLVPPSLVQLILLS 1351
Human 1352 RIIHMLRLGKGPKVFHNLMLPLMLSLPALLNIILLIFLVMFIYAVFGMYNFAYVKKEAGINDVSN 1416
Human 1417 FETFGNSMLCLFQVAIFAGWDGMLDAIFNSKWSDCDPDKINPGTQVRGDCGNPSVGIFYFVSYIL 1481
Human 1482 ISWLIIVNMYIVVVMEFLNIASKKKNKTLSEDDFRKFFQVWKRFDPDRTQYIDSSKLSDFAAALD 1546
Human 1547 PPLFMAKPNKGQLIALDLPMAVGDRIHCLDILLAFTKRVMGQDVRMEKVVSEIESGFLLANPFKI 1611
Human 1612 TCEPITTTLKRKQEAVSATIIQRAYKNYRLRRNDKNTSDIH---MIDGDRDVHATKEGAYFDKAK 1673
Human 1674 EKS 1676 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN7A | NP_002967.2 | I. /evidence=ECO:0000305 | 100..401 | 163/308 (53%) | |
Ion_trans | 146..403 | CDD:278921 | 141/264 (53%) | ||
II. /evidence=ECO:0000305 | 487..758 | 158/271 (58%) | |||
Ion_trans | 522..717 | CDD:278921 | 116/194 (60%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 70/216 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 801..871 | 31/79 (39%) | |||
III. /evidence=ECO:0000305 | 916..1224 | 176/313 (56%) | |||
Ion_trans | 951..1198 | CDD:278921 | 144/252 (57%) | ||
Na_channel_gate | 1194..1246 | CDD:240441 | 27/51 (53%) | ||
IV. /evidence=ECO:0000305 | 1233..1531 | 168/297 (57%) | |||
Ion_trans | 1268..1497 | CDD:278921 | 135/228 (59%) | ||
scn1lab | NP_001038360.2 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 1 | 1.100 | - | - | O | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.930 |