Sequence 1: | NP_002967.2 | Gene: | SCN7A / 6332 | HGNCID: | 10594 | Length: | 1682 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956426.2 | Gene: | scn1laa / 393101 | ZFINID: | ZDB-GENE-040426-751 | Length: | 1955 | Species: | Danio rerio |
Alignment Length: | 1962 | Identity: | 847/1962 - (43%) |
---|---|---|---|
Similarity: | 1152/1962 - (58%) | Gaps: | 317/1962 - (16%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MLASPEPKGLVPFTKESFELIKQHIA-----KTHNEDHEEED----LKPTPDLEVGKKLPFIYGN 56
Human 57 LSQGMVSEPLEDVDPYYYKKKNTFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQ 121
Human 122 LFILISVLIDCVFMSLTNLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFS 186
Human 187 VTVFEVIIRYSPLDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIF 251
Human 252 SLIGMGLFMGNLKHKCFRWPQ--ENENETLHNRTGNPYYIRETENFYYLEGERYALLCGNRTDAG 314
Human 315 QCPEGYVCVKAGINPDQGFTNFDSFGWALFALFRLMAQDYPEVLYHQILYASGKVYMIFFVVVSF 379
Human 380 LFSFYMASLFLGILAMAYEEEKQRVGEISKKIEPKF----QQTGKELQE--------------GN 426
Human 427 ETD-----------EAKTIQIEMKKR--------------------------------------- 441
Human 442 -----SPISTDTSL--------------------------------------------------- 450
Human 451 ------------------------------------------------------------DVLED 455
Human 456 A-------------------TLRHK------------EELEKSKKICPLYWYKFAKTFLIWNCSP 489
Human 490 CWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNTLLNIGNLVFIGIFTAEMIF 554
Human 555 KIIAMHPYGYFQVGWNIFDSMIVFHGLIELCLANV-AGMALLRLFRMLRIFKLGKYWPTFQILMW 618
Human 619 SLSNSWVALKDLVLLLFTFIFFSAAFGMKLFGKNYEEFVCHIDKDCQLPRWHMHDFFHSFLNVFR 683
Human 684 ILCGEWVETLWDCMEVAGQSWCIPFYLMVILIGNLLVLYLFLALVSSFSSCKDVTAEENNEAKNL 748
Human 749 QLAVARIKKGINYV------LLKILC----KTQNVPKDTMDHVNEVYVKEDISDHTLSELSNTQD 803
Human 804 FLKDKEKSSGTEKNATENESQSLIPSPSVSETVPIASGESDIENLDNKEIQSKSGD-GGSKEKIK 867
Human 868 Q--SSSSECSTVD-------------IAISEE---EEMFYGGERSKHLKNGCRRGSSLGQISGAS 914
Human 915 KKG--KIWQNIRKTCCKIVENNWFKCFIGLVTLLSTGTLAFEDIYMDQRKTIKILLEYADMIFTY 977
Human 978 IFILEMLLKWMAYGFKAYFSNGWYRLDFVVVIVFCLSLIGKT-----REELKPLISMKFLRPLRV 1037
Human 1038 LSQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGVDLFAGRFYECIDPTSGERFPSSEVM 1102
Human 1103 NKSRCESLLFNESMLWENAKMNFDNVGNGFLSLLQVATFNGWITIMNSAIDSVAVNIQPHFEVNI 1167
Human 1168 YMYCYFINFIIFGVFLPLSMLITVIIDNFNKHKIKLGGSNIFITVKQRKQYRRLKKLMYEDSQRP 1232
Human 1233 VPRPLNKLQGFIFDVVTSQAFNVIVMVLICFQAIAMMIDTDVQSLQMSIALYWINSIFVMLYTME 1297
Human 1298 CILKLIAFRCFYFTIAWNIFDFMVVIFSITGLCLPMTVGSYLVPPSLVQLILLSRIIHMLRLGKG 1362
Human 1363 PKVFHNLMLPLMLSLPALLNIILLIFLVMFIYAVFGMYNFAYVKKEAGINDVSNFETFGNSMLCL 1427
Human 1428 FQVAIFAGWDGMLDAIFNSKWSDCDPDKINPGTQVRGDCGNPSVGIFYFVSYILISWLIIVNMYI 1492
Human 1493 VVVMEFLNIASKKKNKTLSEDDFRKFFQVWKRFDPDRTQYIDSSKLSDFAAALDPPLFMAKPNKG 1557
Human 1558 QLIALDLPMAVGDRIHCLDILLAFTKRVMGQDVRMEKVVSEIESGFLLANPFKITCEPITTTLKR 1622
Human 1623 KQEAVSATIIQRAYKNYRLR------RNDK-------------NTSDIHMIDGDRDVHATKE--- 1665
Human 1666 --GAYFDKAKEK 1675 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN7A | NP_002967.2 | I. /evidence=ECO:0000305 | 100..401 | 154/302 (51%) | |
Ion_trans | 146..403 | CDD:278921 | 136/258 (53%) | ||
II. /evidence=ECO:0000305 | 487..758 | 155/271 (57%) | |||
Ion_trans | 522..717 | CDD:278921 | 115/195 (59%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 58/214 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 801..871 | 21/72 (29%) | |||
III. /evidence=ECO:0000305 | 916..1224 | 168/314 (54%) | |||
Ion_trans | 951..1198 | CDD:278921 | 138/251 (55%) | ||
Na_channel_gate | 1194..1246 | CDD:240441 | 27/51 (53%) | ||
IV. /evidence=ECO:0000305 | 1233..1531 | 168/297 (57%) | |||
Ion_trans | 1268..1497 | CDD:278921 | 135/228 (59%) | ||
scn1laa | NP_956426.2 | Ion_trans | 150..416 | CDD:278921 | 139/266 (52%) |
Na_trans_cytopl | 483..594 | CDD:288761 | 5/110 (5%) | ||
Ion_trans | 749..945 | CDD:278921 | 115/195 (59%) | ||
Na_trans_assoc | 972..1161 | CDD:284034 | 59/214 (28%) | ||
Ion_trans | 1184..1438 | CDD:278921 | 140/255 (55%) | ||
Na_channel_gate | 1430..1482 | CDD:240441 | 27/51 (53%) | ||
Ion_trans | 1504..1742 | CDD:278921 | 137/237 (58%) | ||
GPHH | 1752..1801 | CDD:293510 | 25/48 (52%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 1 | 1.100 | - | - | O | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.930 |