Sequence 1: | NP_002967.2 | Gene: | SCN7A / 6332 | HGNCID: | 10594 | Length: | 1682 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593894.1 | Gene: | cch1 / 2542812 | PomBaseID: | SPAC6F6.01 | Length: | 1854 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 2000 | Identity: | 400/2000 - (20%) |
---|---|---|---|
Similarity: | 760/2000 - (38%) | Gaps: | 562/2000 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 12 PFTKESFELIKQHIAKTHNEDH-------------EEEDLKPTPDLEVGKKLPFIYGNLSQGMVS 63
Human 64 EPLEDVD----------PYYYKKKNTFI--VLNKNRT-------IFRFNAASILCTLSP-----F 104
Human 105 NCIRRTTIKVL-----------------------VHPFFQLFILISVLIDCVFMSL-TNLPKWRP 145
Human 146 VLENTL---LGI-YTFEILVKLFARG-VWAGSFSF-----------------LGDPWNWLDF--S 186
Human 187 VTVFEVIIRYSPLDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIF 251
Human 252 SLIGMGLFMGNLKHKCFRWPQENENETLHNRTGNPYYIRETENF---YYLEGERYALLCGNRTDA 313
Human 314 GQCPEGYVCVKAGI-----NPDQGFTNFDSFGWALFALFRLMAQD-YPEVLYHQILYASGKVYMI 372
Human 373 FFVVVSFLFSFYMASLFLGILAMAYEEEKQRVGEISKKIEPKFQQTGKELQEGNETDEAKTIQIE 437
Human 438 MKKRSPISTDTSLDVLEDATLRHKEELEKSKKICPLYWYKFAKTFLIWNCSPCWLKLKEFVHRII 502
Human 503 MAPFTDLFLIICIILNVCFLTLEHYPMSKQTNTLLNIGNLVFIG----IFTAEMIFKIIAMHP-Y 562
Human 563 G-YFQVGWNIFDSMIVFHGLIELCLA---NVAGMALLRLFRMLRIFKLGKYWPTFQILMWSLSNS 623
Human 624 WVALKDLVLLLFTFIFFSAAFGMKLF------GKNYEEFVCHIDKDCQLPRWHMHDFFHSFLNVF 682
Human 683 RILCGE-WVETLWDCMEVAGQ---SWCIP--FYLMVILIGNLLVLYLFLALVS-SFSSCKDVTAE 740
Human 741 ENNEAKNLQLAVARIKKGIN----YVLLKILCKTQNVPK-DTMDHVNEVYVKEDISDHTLSELSN 800
Human 801 TQDFLKDKEKSSGTEKNATENESQSLIPSPSVSETVPIASGESDIENLDNKEIQSKSGDGGSKEK 865
Human 866 IKQSSSSECSTVDIAISEEEEM--------------FYGGERSKHLKNGCRRGSSLGQISGASKK 916
Human 917 GKIWQNIRKTCCKIV------------ENNW---------FKCFIGLVTLLSTGTLAFE-DIYMD 959
Human 960 QRKTIKILLEYADMIFTYIFILEMLLKWMAYGF----KAYFSNGWYRLDFVVVIVFCLSLIG-KT 1019
Human 1020 REEL--KPLISMKFLRPLRVLSQFE-RMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGVDLFA 1081
Human 1082 GRFYECIDPTSGERFPSSEVMNKSRCESLLFNES----------MLWEN-AKMNFDNVGNGFLSL 1135
Human 1136 LQVATFNGWITIMNSAIDSVAVNIQPHFEVNIYMYCYFINFIIFGVFLPLSMLITVIIDNFNKHK 1200
Human 1201 IKLGGSNIFITVKQRK--QYRRLKKLMYEDSQRPVPRPLNKLQGFIFDV------VTSQAFNVIV 1257
Human 1258 MVLICFQAIAMMIDTDVQSLQMSIALYWI-NSIFVML---YTMECILKLIAFRCFYFTIA-WNIF 1317
Human 1318 DFMVVIFSITGLCLPMTVGSY------LVPPSLVQLILLSRIIHMLRLGKGPKV--FHNLMLPLM 1374
Human 1375 LSLPALLNIILLIFLVMFIYAVFGMYNFAYVKKEAGIN--DVSNFETFGNSMLCLFQVAIFAGW- 1436
Human 1437 DGMLDAIFNSKWSDCDPDKINPGTQVRGDCGNPSVGIFYFVSYILISWLIIVNMYIVVVME-FLN 1500
Human 1501 IASKKKNKT-LSEDDFRKFFQVWKRFDPDRTQYIDSSKLSDFAAA-------------------- 1544
Human 1545 --------------LDPPLFMAKPNKGQLIALD---------------------------LPMAV 1568
Human 1569 GDRIHCLDILL----------------------AFTKRVMGQDVRMEKVVSEIESGFL------- 1604
Human 1605 -------LANPFKITCE--------PITTTLKR------------KQEAV---SATIIQRAYKNY 1639
Human 1640 RLRRNDKNTS-DIH------------------MIDGDRDVHATKEGAYFD 1670 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN7A | NP_002967.2 | I. /evidence=ECO:0000305 | 100..401 | 69/362 (19%) | |
Ion_trans | 146..403 | CDD:278921 | 57/289 (20%) | ||
II. /evidence=ECO:0000305 | 487..758 | 61/292 (21%) | |||
Ion_trans | 522..717 | CDD:278921 | 45/215 (21%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 36/202 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 801..871 | 13/69 (19%) | |||
III. /evidence=ECO:0000305 | 916..1224 | 76/350 (22%) | |||
Ion_trans | 951..1198 | CDD:278921 | 62/266 (23%) | ||
Na_channel_gate | 1194..1246 | CDD:240441 | 17/53 (32%) | ||
IV. /evidence=ECO:0000305 | 1233..1531 | 84/321 (26%) | |||
Ion_trans | 1268..1497 | CDD:278921 | 62/244 (25%) | ||
cch1 | NP_593894.1 | Ion_trans | 201..485 | CDD:278921 | 58/296 (20%) |
Ion_trans | 533..748 | CDD:278921 | 52/244 (21%) | ||
Ion_trans | 968..1220 | CDD:278921 | 61/264 (23%) | ||
Ion_trans | 1289..1517 | CDD:278921 | 65/254 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 83 | 1.000 | Domainoid score | I2557 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |