Sequence 1: | NP_002967.2 | Gene: | SCN7A / 6332 | HGNCID: | 10594 | Length: | 1682 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367691.1 | Gene: | cca-1 / 181045 | WormBaseID: | WBGene00000367 | Length: | 1885 | Species: | Caenorhabditis elegans |
Alignment Length: | 1766 | Identity: | 412/1766 - (23%) |
---|---|---|---|
Similarity: | 752/1766 - (42%) | Gaps: | 431/1766 - (24%) |
- Green bases have known domain annotations that are detailed below.
Human 108 RRTTIKVLVHPFFQLFILISVLIDCVFMSLTNLPKWRP----------------VLENTLLGIYT 156
Human 157 FEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSPLDF------IPTLQTARTLRILK 215
Human 216 IIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGMGLFMGNLKHKC-FRWPQ---ENEN 276
Human 277 ETLHNRTGNPYYIRETENFYYLEGERYA---LLCGN----RTDAGQCP---EGY------VCVKA 325
Human 326 GI----------NPDQGFTNFDSFGWALFALFRLMA-QDYPEVLYHQILYASGKVYMIFFVVVSF 379
Human 380 LFSFYMASLFLGILAMAYEEEKQRVGEISKKIEPK--------FQQTGKEL------QEGN---- 426
Human 427 --------------------------ETDEAKTIQIEMKKRSPISTDTSLDVLEDATLRHKEEL- 464
Human 465 ----------------------------------------------------------------E 465
Human 466 KSKKICP--LYWYKFAKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYP 528
Human 529 MSKQTNTLLNIGNLVFIGIFTAEMIFKIIAMHPYGYFQVGWNIFDSMIVFHGLIELCLANVAGMA 593
Human 594 LLRLFRMLRIFKLGKYWPTFQ----ILMWSLSNSWVALKDLVLLLFTFIFFSAAFGMKLFG---- 650
Human 651 ----------------KNYE------------------EFVCH------------IDKDCQLPRW 669
Human 670 HMHDFFHSFLNVFRILCGE-WVETLWDCMEVAGQSWCIPFYLMVILIGNLLVLYLFLA-LVSSFS 732
Human 733 SCKD-------------VTAEENNEAKNLQLAVAR-----IKKGINYVLLKILCKTQNVPKDTMD 779
Human 780 H--VNEVYVKEDISDHTLS---------ELSNTQDFLKDKEKSSGTEKNATENESQSLIPSPSVS 833
Human 834 ETVPIASGESDIENLDNKEIQSKSG------------------DGGSKEKIKQSSSSECSTVDIA 880
Human 881 ISEEEEMFYGGERS---KHLKNGCRRGSSLGQISGASKKGKIWQNIRKTCCKIVENNWFK----C 938
Human 939 FIGLVTLLSTGTLAFEDIYMDQRKTIKILLEYADMIFTYIFILEMLLKWMA----YGFKAYFSNG 999
Human 1000 WYRLDFVVVIVFCLSLIGKTREEL------------KPLISMKFLRPLRVLSQFERMKVVVRALI 1052
Human 1053 KTTLPTLNVFLVCLMIWLIFSIMGVDLFAGRFYECIDPTSGERFPSSEVMNKSRCESLLFNESML 1117
Human 1118 WENAKMNFDNVGNGFLSLLQVATFNGWITIMNSAIDSVAVNIQPHFEVNIYMYCYFINFIIFGVF 1182
Human 1183 LPLSMLITVIIDNFNKHKIKLGGSNIFITVKQRKQYRRLKKLMYEDSQR----------PVPRPL 1237
Human 1238 NKLQGFIFDVVTSQAFNVIVMVLICFQAIAMMIDTDVQSLQMSIALYWINSIFVMLYTMECILKL 1302
Human 1303 IA--FRCFYFTIAWNIFDFMVVIFSITGLC--------LPMTVGSYLVPPSLVQLILLSRIIHML 1357
Human 1358 RLGKGPKVFHNLMLPLMLSLPALLNIILLIFLVMFIYAVFGMYNFAYVKKEA-------GINDVS 1415
Human 1416 NFETFGNSMLCLFQVAIFAGWDG-MLDAIFNSKWSDCD-PDKINPGTQVRGDCGNPSVGIFYFVS 1478
Human 1479 YILISWLIIVNMYIVVVMEFLNIASKK-------------KNK-TLSEDDFRKFFQVWKRFDPDR 1529
Human 1530 TQYIDSSKLSD 1540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN7A | NP_002967.2 | I. /evidence=ECO:0000305 | 100..401 | 80/345 (23%) | |
Ion_trans | 146..403 | CDD:278921 | 73/293 (25%) | ||
II. /evidence=ECO:0000305 | 487..758 | 84/344 (24%) | |||
Ion_trans | 522..717 | CDD:278921 | 63/249 (25%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 35/220 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 801..871 | 14/87 (16%) | |||
III. /evidence=ECO:0000305 | 916..1224 | 106/327 (32%) | |||
Ion_trans | 951..1198 | CDD:278921 | 90/262 (34%) | ||
Na_channel_gate | 1194..1246 | CDD:240441 | 13/61 (21%) | ||
IV. /evidence=ECO:0000305 | 1233..1531 | 87/330 (26%) | |||
Ion_trans | 1268..1497 | CDD:278921 | 71/247 (29%) | ||
cca-1 | NP_001367691.1 | Ion_trans | 129..461 | CDD:395416 | 81/341 (24%) |
Ion_trans | 659..938 | CDD:395416 | 73/283 (26%) | ||
Ion_trans | 1159..1430 | CDD:395416 | 97/286 (34%) | ||
Ion_trans | 1488..1721 | CDD:395416 | 70/251 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |