Sequence 1: | NP_002967.2 | Gene: | SCN7A / 6332 | HGNCID: | 10594 | Length: | 1682 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498054.2 | Gene: | nca-2 / 175674 | WormBaseID: | WBGene00003558 | Length: | 1785 | Species: | Caenorhabditis elegans |
Alignment Length: | 1827 | Identity: | 361/1827 - (19%) |
---|---|---|---|
Similarity: | 709/1827 - (38%) | Gaps: | 434/1827 - (23%) |
- Green bases have known domain annotations that are detailed below.
Human 57 LSQGMVSEPLEDVDPYYYKKKNTFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQ 121
Human 122 LFILISVLIDCVFMSL---TNLPKWRP----VLENTLLG--IYTFEILVKLFARGVWAGSFSFLG 177
Human 178 DPWNWLDFSVTVFEVI-----------IRYSPLDFI-----PTLQTART---LRILKIIPLNQGL 223
Human 224 KSLVGVLI-HCLKQLIGVIILTLFFLSIFSLIGMGLFMGNLKHKCFRWPQENENETLHNRTGNPY 287
Human 288 YIRETENFYYLEGERYALLCGNRTDAG-QCPEGYVCVKAGINP-DQGF-TNFDSFGWALFALFRL 349
Human 350 MAQD-YPEVLYHQILYASGKVYMIFFVVVSFLFSFYMASLFLGILAMAYEEEKQRVGEISKKIEP 413
Human 414 KFQQTGKELQEGNETDEAKTIQIEMKKRSPISTDTSLDVLEDATLRHKEELEKSKKICPLYWYKF 478
Human 479 AKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCF--LTLEHYPMSKQTNTL----L 537
Human 538 NIGNLVFIGIFTAEMIFKIIAMHPYGYFQVGWNIFDSMIVFHGLIELCLANVAGMA-------LL 595
Human 596 RLFRMLRIFKLGKYWPTFQILMWSLSNSWVALKDLVLLLFTFIFFSAAFGMKLFGKNYEEFVCHI 660
Human 661 DKDCQLPRWH-MHDFFHSFLNVFRILCGE-W----VETLWDCMEVAGQSWCIPF----YLMVILI 715
Human 716 GNLLVLYLFLALV-------SSFSSCKDVTAEENNEAKN---LQLAV-ARIKKGINYVLLKILCK 769
Human 770 TQNVPKDTMDHVNEVYVKE--DISDHTLSELS-NTQDFLKDKEKSSGTEKNATENE----SQSLI 827
Human 828 PSPSVSET----VPIASGESDIENLDNKEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMF 888
Human 889 YGGERSKHLK--NGCRRGSSLGQIS----------GASKKGKIWQNIR----------------- 924
Human 925 --KTCCKIV----------------ENNWFKCF-------------IGLVTLLSTGTLAFEDIYM 958
Human 959 DQRKTI---KILLEYADMIFTYIFILEMLLKWMAYGF----KAYFSN-GWYRLDFVVVIVFCLSL 1015
Human 1016 IG--------KTREELKPLISMKFLRPLRVLSQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIF 1072
Human 1073 SIMGVDLFAGRFYECIDPTSGERFPSSEVMNKSRCESL----LF---------NESML------- 1117
Human 1118 --WENAK-MNFDNVGNGFLSLLQVATFNGWITIMNSAIDSVAVNIQPHFEVNIYM-----YCYFI 1174
Human 1175 NFIIF-GVFLPLSMLITVIIDNFNKHKIKLGGSNIFITVKQRKQYRRLKKLMYEDSQRPVPRPLN 1238
Human 1239 --KLQGFIFDVVTSQAFNVIVMVLICFQAIAMMIDTDVQSLQ----MSIALYWINSIFVMLYTME 1297
Human 1298 CILKLIAFRCFYFTIAW----NIFDFMVVIFSITGLC--------------------LPMTVGSY 1338
Human 1339 LVPPSLVQLILLSRIIHMLRLGKGPKVFHNLMLPLMLSLPALLNIILLIFLVMFIYAVFGMYNFA 1403
Human 1404 YVKKEAGINDVSNFETFGNSMLCLFQVAIFAGWDGMLDAIFNSKWSDC--DPDKIN--PGTQV-R 1463
Human 1464 GDCGNPSVGIFYFVSYILISWLIIVNMYIVVVME-FLNIASKKKNKTLSEDDFRKFFQVWKRFDP 1527
Human 1528 DRTQYIDSSKLSDFAAALDPPLFMAKPNKGQLIALDLPMAV--------------GDRIHCLDIL 1578
Human 1579 --LAFTKRVMGQDVRMEKVVSEIESGFLLANPFKITCEPITTTLKRKQEAVSATI---IQRAYKN 1638
Human 1639 YRLRRND 1645 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN7A | NP_002967.2 | I. /evidence=ECO:0000305 | 100..401 | 68/333 (20%) | |
Ion_trans | 146..403 | CDD:278921 | 59/282 (21%) | ||
II. /evidence=ECO:0000305 | 487..758 | 62/304 (20%) | |||
Ion_trans | 522..717 | CDD:278921 | 44/215 (20%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 37/229 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 801..871 | 13/77 (17%) | |||
III. /evidence=ECO:0000305 | 916..1224 | 74/400 (19%) | |||
Ion_trans | 951..1198 | CDD:278921 | 59/291 (20%) | ||
Na_channel_gate | 1194..1246 | CDD:240441 | 10/53 (19%) | ||
IV. /evidence=ECO:0000305 | 1233..1531 | 88/333 (26%) | |||
Ion_trans | 1268..1497 | CDD:278921 | 66/261 (25%) | ||
nca-2 | NP_498054.2 | Ion_trans | 95..371 | CDD:278921 | 61/294 (21%) |
Ion_trans | 444..649 | CDD:278921 | 50/234 (21%) | ||
Ion_trans | 959..1202 | CDD:278921 | 58/271 (21%) | ||
Ion_trans | 1288..1518 | CDD:278921 | 67/252 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |