Sequence 1: | NP_001359503.1 | Gene: | ATXN2 / 6311 | HGNCID: | 10555 | Length: | 1155 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011694.3 | Gene: | PBP1 / 853089 | SGDID: | S000003410 | Length: | 722 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 963 | Identity: | 187/963 - (19%) |
---|---|---|---|
Similarity: | 300/963 - (31%) | Gaps: | 392/963 - (40%) |
- Green bases have known domain annotations that are detailed below.
Human 32 AAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGLPQST 96
Human 97 ISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDL--------------VLDA 147
Human 148 AHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSY------AKRDAFTDSAIS---AKVN 203
Human 204 GEH-------------------KEKDLEPWDAGELTANEEL---EALENDVSNGWDPNDMFRYNE 246
Human 247 ENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESS--------AQYKARVALEND 303
Human 304 DRSEEEKYTAVQRNSSE-----REGHSINTRE-NKYIPPGQRNREVISWGSGRQNSPRMGQPGSG 362
Human 363 SMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAA-------- 419
Human 420 -----TP-----------TRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQ 468
Human 469 RHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSP 533
Human 534 RQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTPSSEAKDSRLQDQRQNS 598
Human 599 PAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNR 663
Human 664 EGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTS 728
Human 729 SPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPR------------PQ 781
Human 782 AQPSPSMVGHQQPT-----PVYTQPVCFAPNM--MYPVPVSPGVQ-------------------- 819
Human 820 -PL----YP--IPM--------TPMPVNQAKTYRAGKVPNMPQQRQDQHHQSA 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ATXN2 | NP_001359503.1 | SM-ATX | 105..181 | CDD:373069 | 17/89 (19%) |
PBP1 | 194..>339 | CDD:227507 | 50/183 (27%) | ||
LsmAD | 249..310 | CDD:369058 | 20/68 (29%) | ||
PRK12323 | <408..599 | CDD:237057 | 31/214 (14%) | ||
PAM2 | 750..765 | CDD:336618 | 2/14 (14%) | ||
PHA03247 | <769..1087 | CDD:223021 | 32/143 (22%) | ||
PBP1 | NP_011694.3 | PBP1 | 3..722 | CDD:227507 | 187/963 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C159047265 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001866 | |
OrthoInspector | 1 | 1.000 | - | - | otm52751 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12854 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2220 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.970 |