Sequence 1: | NP_001359503.1 | Gene: | ATXN2 / 6311 | HGNCID: | 10555 | Length: | 1155 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033151.2 | Gene: | Atxn2 / 20239 | MGIID: | 1277223 | Length: | 1286 | Species: | Mus musculus |
Alignment Length: | 1160 | Identity: | 1056/1160 - (91%) |
---|---|---|---|
Similarity: | 1096/1160 - (94%) | Gaps: | 29/1160 - (2%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSAT 65
Human 66 APSSVVAATS---GGGRPGLGRGRNSNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNG 127
Human 128 GIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAKRDA 192
Human 193 FTDSAISAKVNGEHKEKDLEPWDAGELTANEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDS 257
Human 258 SLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSERE 322
Human 323 GHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVN 387
Human 388 GGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMP 452
Human 453 KRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVV 517
Human 518 SGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTP 582
Human 583 SSEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQ 647
Human 648 PSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIE--NSSSNCTSGSSKPNSPSISPSILS 710
Human 711 NTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTP 775
Human 776 TSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAG 840
Human 841 KVPNMPQQRQDQHHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHP 905
Human 906 HVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGS 970
Human 971 LAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAI 1035
Human 1036 YHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPS 1100
Human 1101 HPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL 1155 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ATXN2 | NP_001359503.1 | SM-ATX | 105..181 | CDD:373069 | 73/75 (97%) |
PBP1 | 194..>339 | CDD:227507 | 136/144 (94%) | ||
LsmAD | 249..310 | CDD:369058 | 60/60 (100%) | ||
PRK12323 | <408..599 | CDD:237057 | 180/190 (95%) | ||
PAM2 | 750..765 | CDD:336618 | 14/14 (100%) | ||
PHA03247 | <769..1087 | CDD:223021 | 308/317 (97%) | ||
Atxn2 | NP_033151.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..85 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 111..178 | 21/48 (44%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 197..224 | 19/26 (73%) | |||
SM-ATX | 237..306 | CDD:291131 | 67/68 (99%) | ||
LsmAD | 378..439 | CDD:284215 | 60/60 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 428..925 | 456/496 (92%) | |||
PAM2 | 880..896 | CDD:284542 | 15/15 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1111..1191 | 77/79 (97%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C83967342 | |
Domainoid | 1 | 1.000 | 807 | 1.000 | Domainoid score | I2791 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
HGNC | 1 | 1.500 | - | - | ||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2234 | |
Inparanoid | 1 | 1.050 | 2309 | 1.000 | Inparanoid score | I1117 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG54638 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001866 | |
OrthoInspector | 1 | 1.000 | - | - | oto122330 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_114721 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12854 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2220 |
SonicParanoid | 1 | 1.000 | - | - | X8608 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 15.430 |