DRSC/TRiP Functional Genomics Resources

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Protein Alignment SALL1 and sall1a

DIOPT Version :10

Sequence 1:NP_002959.2 Gene:SALL1 / 6299 HGNCID:10524 Length:1324 Species:Homo sapiens
Sequence 2:NP_001139486.1 Gene:sall1a / 555721 ZFINID:ZDB-GENE-020228-2 Length:1313 Species:Danio rerio


Alignment Length:1353 Identity:926/1353 - (68%)
Similarity:1062/1353 - (78%) Gaps:69/1353 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLLHKKNC 65
            |||||||||||||||.::. |...:||||......|.|...||||.||||||||||||..|:|||
Zfish     1 MSRRKQAKPQHFQSDSQLV-LAEHNGDTETNPDDSPCKDSGAHVCSRCCAEFFELSDLEQHQKNC 64

Human    66 TKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTVNKTDQVDCSDLSEHNGLDREESMEVE-- 128
            |||||||||||||.||..||||...|.|||||||||.|.|||.:.:||.|.|.||:||:|:.|  
Zfish    65 TKNQLVLIVNENPVSPSGTFSPGSSPHNPDEQMNDTTNNTDQAELTDLLEQNILDKEEAMDTEMS 129

Human   129 ---APVANKSGSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSV 190
               ||  :..|:|..:||    :|.|...:...:.|...|:.|:|.|:.||||||:||.|||||:
Zfish   130 GVSAP--HNDGNGRMAGS----SPLSGVGTGHGTLGSTGSNLGSSVISASLPQLGNLTELGNFSM 188

Human   191 INSNVIIENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQIL 255
            |||||||||||||||||||||||.|..|  |.::|||||||||||||||||||||||||||||||
Zfish   189 INSNVIIENLQSTKVAVAQFSQETRATG--GQRVAVPALMEQLLALQQQQIHQLQLIEQIRHQIL 251

Human   256 LLASQNADL--PTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPP 318
            |||||:.:|  |.||||.  ||.:..:||:|||||||||||||||||||:||||||||.:||:..
Zfish   252 LLASQSPELQAPPSSSPV--TLGSGTSPLTTLSSHLSQQLAAAAGLAQSIASQSASISSLKQMAN 314

Human   319 I-QLPQSSS--GNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASH--VSNPAVSSSSSPAF 378
            : |||||:|  |.:   |.|.::|.    .|.|.....||...:||:.|  :.||:::.||:|||
Zfish   315 VAQLPQSNSSVGES---SQSLAAPG----PAPVNAQPLEKRPGNAGSLHPPLGNPSLAKSSTPAF 372

Human   379 AISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLSALAQQRKSKPPNVTAFEAKSTSD 443
            |:.:||:|.:|.||||....|.:|.|.||::|:|.||||||:|||||||.|||||::||.||:|:
Zfish   373 AMGNLLNPVANTLLPQPPPGNPIFSSALPSVGSTVEDLNSLAALAQQRKGKPPNVSSFEPKSSSE 437

Human   444 EAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQM 508
            :.|||||||||.|||||||||||||||||||||:|||||||||||:|||||||||||||||||||
Zfish   438 DTFFKHKCRFCGKVFGSDSALQIHLRSHTGERPYKCNICGNRFSTRGNLKVHFQRHKEKYPHIQM 502

Human   509 NPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTE 573
            |||||||||||||||||||||||:|||||||||||:||||.|||:|||:.||||:|||.||||.|
Zfish   503 NPYPVPEHLDNIPTSTGIPYGMSMPPEKPVTSWLDSKPVLSTLTSSVGMLLPPTIPSLPPFIKKE 567

Human   574 EPAPIPISHSATSPPGSVKSDSGGPESATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTAS 638
            |...:.||    ||..|.|||||..::..:|...:.||.|.:|||.|.||:||:...:|.:...|
Zfish   568 ENNSLAIS----SPSHSAKSDSGPADTPMKNTDSVLEEGESTTLPTSNGKAEENNQSSNLLSNMS 628

Human   639 SSVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKAT 703
            |:|  ....:...:.|....||||:||||||||||||||||||..|.||||||||||||||:|..
Zfish   629 SAV--EGTIEYTTSNSPPMATNPLMPLMSEQFKAKFPFGGLLDPLQGSETSKLQQLVENIDRKVA 691

Human   704 DPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSC 768
            |||||:||||:|||||||||||||||||||||||:||||||||||||||||||||||||||||||
Zfish   692 DPNECVICHRILSCQSALKMHYRTHTGERPFKCKVCGRAFTTKGNLKTHYSVHRAMPPLRVQHSC 756

Human   769 PICQKKFTNAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENM---E 830
            |||||||||||||||||||||||||||||:||:|.|||.||.|||||:|.||||||||:||   |
Zfish   757 PICQKKFTNAVVLQQHIRMHMGGQIPNTPLPDNYPESMGSDAGSFDERNIDDLDNFSDDNMEGIE 821

Human   831 DCPEGSIPDTPKSADASQDSLSSSPLPLEMSSIAALEN-QMKMINAGLAEQLQASL-KSVENGSI 893
            |.|:.||||||||.|||||||.|||...|  |....|. |.|..|.|..|::|... ||||||.:
Zfish   822 DGPDSSIPDTPKSVDASQDSLCSSPTLHE--SFGMDERIQEKSANHGAGEEVQYDQGKSVENGLV 884

Human   894 EGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQRAVPSE--- 955
            |||..||||||:|||:|||||||||:|||||||||.||||...:..||||:|::.|||:..|   
Zfish   885 EGDRFTNDSSSLGGDIESQSAGSPAVSESTSSMQAPSPSNGIFQQQKSPSMEDRQQRALSLEHIS 949

Human   956 ----FANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSAL 1016
                .:|..||     |||||||.::.|    |.:.:|||||:||..||||||||||||||||||
Zfish   950 ASLMHSNSASP-----GALDLTSVNSSK----DPISMLFPFRERGTLKNTACDICGKTFACQSAL 1005

Human  1017 DIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAVIPA--- 1078
            |||||||||||||||||||||||||||||||||||||||||||||||:::|..:..|:..|:   
Zfish  1006 DIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNTSLASSLASSPTPSLLS 1070

Human  1079 -NSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCGKT 1142
             ..|||::|||||||:|....:.||.|    |:...||::|||||..|.||||||||:|.|||||
Zfish  1071 VGPLSSMMKTEVNGFLHGLQPEVKDLP----PALVTSSASTSPVLSAAPPRRTPKQHFCTTCGKT 1131

Human  1143 FSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLG 1207
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||
Zfish  1132 FSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGPMAFLG 1196

Human  1208 GNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGI-PPIPGSLGSGN 1271
            .|||||||:|||||::|:|:|||:|||||||||.|||||||.||||||||||: ||:.||:|:|.
Zfish  1197 TNPVKFPELFQKDLSSRAGNGDPTSFWNQYAAAFSNGLAMKTNEISVIQNGGLPPPLSGSVGNGG 1261

Human  1272 SSPVSGLTGNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS 1324
            |||:.||||::|:|.|||||..||||||||::||||:||||||:|| |||||:
Zfish  1262 SSPIGGLTGSMEKLHNSEPNPALAGLEKMANTENGTHFRFTRFMED-KEIVTN 1313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SALL1NP_002959.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 22/40 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..102 17/24 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127 9/18 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..172 10/39 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..336 8/21 (38%)
SUF4-like 448..530 CDD:411020 78/81 (96%)
C2H2 Zn finger 451..472 CDD:411020 19/20 (95%)
C2H2 Zn finger 451..471 CDD:275368 18/19 (95%)
C2H2 Zn finger 479..499 CDD:411020 18/19 (95%)
C2H2 Zn finger 479..499 CDD:275368 18/19 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..646 26/68 (38%)
C2H2 Zn finger 708..728 CDD:275368 17/19 (89%)
zf-H2C2_2 720..745 CDD:463886 23/24 (96%)
C2H2 Zn finger 736..756 CDD:275368 18/19 (95%)
zf-C2H2 766..788 CDD:395048 21/21 (100%)
C2H2 Zn finger 768..788 CDD:275368 19/19 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 790..856 52/68 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 894..963 45/75 (60%)
C2H2 Zn finger 1003..1023 CDD:275370 19/19 (100%)
SUF4-like 1006..>1050 CDD:411020 43/43 (100%)
C2H2 Zn finger 1006..1024 CDD:411020 17/17 (100%)
zf-C2H2 1029..1051 CDD:395048 21/21 (100%)
C2H2 Zn finger 1031..1051 CDD:275370 19/19 (100%)
C2H2 Zn finger 1031..1050 CDD:411020 18/18 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1095..1120 7/24 (29%)
SUF4-like 1134..>1181 CDD:411020 44/46 (96%)
C2H2 Zn finger 1136..1157 CDD:411020 19/20 (95%)
C2H2 Zn finger 1136..1156 CDD:275368 18/19 (95%)
C2H2 Zn finger 1164..1184 CDD:275368 19/19 (100%)
C2H2 Zn finger 1164..1181 CDD:411020 16/16 (100%)
sall1aNP_001139486.1 SUF4-like 442..526 CDD:411020 80/83 (96%)
C2H2 Zn finger 445..466 CDD:411020 19/20 (95%)
C2H2 Zn finger 445..465 CDD:275368 18/19 (95%)
C2H2 Zn finger 473..493 CDD:411020 18/19 (95%)
C2H2 Zn finger 473..493 CDD:275368 18/19 (95%)
C2H2 Zn finger 696..716 CDD:275368 17/19 (89%)
zf-H2C2_2 708..733 CDD:463886 23/24 (96%)
C2H2 Zn finger 724..744 CDD:275368 18/19 (95%)
zf-C2H2 754..776 CDD:395048 21/21 (100%)
C2H2 Zn finger 756..776 CDD:275368 19/19 (100%)
C2H2 Zn finger 992..1012 CDD:275370 19/19 (100%)
SUF4-like 995..>1039 CDD:411020 43/43 (100%)
C2H2 Zn finger 995..1013 CDD:411020 17/17 (100%)
zf-C2H2 1018..1040 CDD:395048 21/21 (100%)
C2H2 Zn finger 1020..1040 CDD:275370 19/19 (100%)
C2H2 Zn finger 1020..1039 CDD:411020 18/18 (100%)
SUF4-like 1123..>1170 CDD:411020 44/46 (96%)
C2H2 Zn finger 1125..1146 CDD:411020 19/20 (95%)
C2H2 Zn finger 1125..1145 CDD:275368 18/19 (95%)
C2H2 Zn finger 1153..1173 CDD:275368 19/19 (100%)
C2H2 Zn finger 1153..1170 CDD:411020 16/16 (100%)

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