DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SALL1 and salr

DIOPT Version :9

Sequence 1:NP_002959.2 Gene:SALL1 / 6299 HGNCID:10524 Length:1324 Species:Homo sapiens
Sequence 2:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster


Alignment Length:1369 Identity:394/1369 - (28%)
Similarity:560/1369 - (40%) Gaps:338/1369 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    92 DNPDEQMNDTVNKTDQVDCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSS-- 154
            |...|:..||: ...::|..  |.:||  .|..||.||...:.:...|:........|.:|:.  
  Fly    35 DRDRERDRDTL-LAKELDAD--SNNNG--TEPQMEAEAVPESDTERETAEERGEEQEPENSNEAL 94

Human   155 --SSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCG 217
              |..||||           ..|||..|             :|.:|.||.||||||||:..|..|
  Fly    95 DLSLISSGG-----------RESLPGSG-------------HVSLEALQHTKVAVAQFAATAMAG 135

Human   218 GASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSANPL 282
            ......||:  :...:..:|:|.:.|||||:                                  
  Fly   136 NHQSADLAM--VQSTIFNVQRQHLMQLQLIQ---------------------------------- 164

Human   283 STLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAA 347
                 ||..||..|.  |.:|...|.|....::..|...|:..      |:| |....:.:... 
  Fly   165 -----HLQSQLKRAE--AAALGRHSHSDEEEEEPEPEPEPKKQ------PTN-GLKEELELEQG- 214

Human   348 VTTPSSEKVASSAGA--SHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASANSVF----PSPL 406
               |.||:...|...  |...........:......|::...|:.|      |:|:.    |.|.
  Fly   215 ---PESEQDQESRREENSKTDKRGTEDRKAEPEGYQSMMCDISSSL------ASSIITNHDPPPA 270

Human   407 PNIGTTAE----------DLNSLSALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSD 461
            ||.....|          |..|.|..|.|.:.:.....:.||:|..:  .|||:|::|.|:|||.
  Fly   271 PNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGE--IFKHRCKYCGKIFGSY 333

Human   462 SALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTS--- 523
            ||||||||||||||||.||:||::|:||||||||:|||.:.:|.:.:.|...|    |:..|   
  Fly   334 SALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVAP----NVGHSGQG 394

Human   524 --TGIPYGMSI---PPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHS 583
              .|..|.:.:   ||..||........|.........:|:|.......|.:|.:|.:..|:...
  Fly   395 QVQGEQYPIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQAEDLSKPMVKEKEKSHSPVERV 459

Human   584 ATSPPGSVKSDSGGPES-------------ATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVP 635
            .|  |..||:|:..|.|             ::|..|.:.:....:..||...:..:   :...:.
  Fly   460 KT--PKEVKTDAALPSSEKPEKEISKPVVTSSRRNGSVRKRQTSAVSPPQEDRERD---LVEHLH 519

Human   636 TASSSVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDK 700
            .|.....||.:.:..||..:......::....|.         |::..:.||||||||||:||:.
  Fly   520 IAKLVRRSSASRESQPAEYSLAQMERIIDKSWED---------LIEIDKTSETSKLQQLVDNIEN 575

Human   701 KATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQ 765
            |.||||:||.|.:|:||:|:|:||.|||||||||:||||||||.||||||.|.|:|:..||:|.|
  Fly   576 KLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQ 640

Human   766 HSCPICQKKFTNAVVLQQHIRMH-----MGGQIPNTPVPDS------YSESMESDTGSFDEKNFD 819
            ..||:|.:||:|.::||||||:|     .|||......|..      ..::.....|:.|..:|.
  Fly   641 FKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSDTLDFS 705

Human   820 -DLDNFSDENMEDCPEGSIPD--TPKSADASQDSLS---SSPLPLEMSSIAALENQMKMINAGLA 878
             .:.:.|.:..|....|...:  |..|.|.|:|:.|   ::|.|||.......|.:.::.|....
  Fly   706 TTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERERRIPNDCSD 770

Human   879 EQLQASLKSVENGSIEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPS 943
            |      :|..|..:.|      ..|..|:|.:....||:             |||.:       
  Fly   771 E------RSHSNPDLTG------GRSESGEMPAMDLSSPS-------------SNSGR------- 803

Human   944 IEEKPQRAVPSEFANGLSPTPVNGGA---------------LDLTSSHAEKIIKEDSLG------ 987
                       .||.||:.....||:               |.|.::..|::   .:||      
  Fly   804 -----------IFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEM---HALGHAHAKF 854

Human   988 ILFPFRDRGKFKN-----TACDICGKTFACQSALDIHYRS-HTKE-------RPFICTVCNRGFS 1039
            .|.||...| |..     ..|::|.|.....:||:.|.:| |.||       || .|:.....:.
  Fly   855 PLLPFGPLG-FMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRP-QCSDAGSPYG 917

Human  1040 TKGNLKQHMLTHQMRDLPS-----QLFEPSSNLGPNQNSAVIP---------------------- 1077
            .|..|..::...:.....|     :|.|.|:...|.:|....|                      
  Fly   918 AKLTLNPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGS 982

Human  1078 ------------ANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLPALPRRT 1130
                        .::..||:|.:::  .|..|....|...:.:.:||.:||...||         
  Fly   983 GTGATSNYPQEAGDAEQSLMKMQLH--AHRFPASPLDFQQALMSAGPPTSSLDPPV--------- 1036

Human  1131 PKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGR 1195
            ..:|:|:.|.:.||||||||||.|||||:|||.|.:|.:|||||||||||||||||.:..:||||
  Fly  1037 NNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGR 1101

Human  1196 RLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQ------------YAAALSNGLAMK 1248
            |:|::.||     .|           ...||.|.|.|...|            |.....|||..|
  Fly  1102 RMSLELPM-----RP-----------GPNSGQGHPGSSAEQEFMQRRPELFFPYLPPFFNGLPPK 1150

Human  1249 ANEISVIQNGGIPPIPGSLGSGNSSPVSGLTG----------NLERLQNSEPNAPLAGLEKMASS 1303
            ..|:|......|||.|.:.|.....| .||.|          .|||..:|:...|..........
  Fly  1151 PGELSPGAFPNIPPPPFANGGKYPYP-PGLLGFPGFLAQHPYILERRSSSKSPTPEPAQSPALRE 1214

Human  1304 ENGT 1307
            |.|:
  Fly  1215 EEGS 1218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SALL1NP_002959.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..102 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..172 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..336 4/18 (22%)
C2H2 Zn finger 451..471 CDD:275368 14/19 (74%)
zf-H2C2_2 463..488 CDD:290200 20/24 (83%)
C2H2 Zn finger 479..499 CDD:275368 14/19 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..646 15/81 (19%)
C2H2 Zn finger 708..728 CDD:275368 11/19 (58%)
zf-H2C2_2 720..745 CDD:290200 20/24 (83%)
C2H2 Zn finger 736..756 CDD:275368 16/19 (84%)
zf-C2H2 766..788 CDD:278523 12/21 (57%)
C2H2 Zn finger 768..788 CDD:275368 12/19 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 790..856 16/77 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 894..963 13/68 (19%)
C2H2 Zn finger 1003..1023 CDD:275370 7/20 (35%)
zf-H2C2_2 1015..1040 CDD:290200 10/32 (31%)
zf-C2H2 1029..1051 CDD:278523 3/21 (14%)
C2H2 Zn finger 1031..1051 CDD:275370 3/19 (16%)
lambda-1 1064..>1155 CDD:212564 29/124 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1095..1120 6/24 (25%)
zf-C2H2 1134..1156 CDD:278523 14/21 (67%)
C2H2 Zn finger 1136..1156 CDD:275368 13/19 (68%)
zf-H2C2_2 1148..1173 CDD:290200 17/24 (71%)
C2H2 Zn finger 1164..1184 CDD:275368 15/19 (79%)
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 15/21 (71%)
C2H2 Zn finger 323..343 CDD:275368 14/19 (74%)
zf-H2C2_2 335..360 CDD:290200 20/24 (83%)
C2H2 Zn finger 351..371 CDD:275368 14/19 (74%)
C2H2 Zn finger 583..603 CDD:275368 11/19 (58%)
zf-H2C2_2 595..620 CDD:290200 20/24 (83%)
C2H2 Zn finger 611..631 CDD:275368 16/19 (84%)
C2H2 Zn finger 643..663 CDD:275368 12/19 (63%)
lambda-1 1013..>1061 CDD:212564 20/56 (36%)
zf-C2H2 1040..1062 CDD:278523 14/21 (67%)
C2H2 Zn finger 1042..1062 CDD:275368 13/19 (68%)
zf-H2C2_2 1054..1079 CDD:290200 17/24 (71%)
C2H2 Zn finger 1070..1090 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7769
eggNOG 1 0.900 - - E1_KOG1074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5659
OMA 1 1.010 - - QHG47594
OrthoDB 1 1.010 - - D130294at33208
OrthoFinder 1 1.000 - - FOG0001008
OrthoInspector 1 1.000 - - otm40936
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23233
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X498
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
109.930

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