Sequence 1: | NP_005610.1 | Gene: | RTN2 / 6253 | HGNCID: | 10468 | Length: | 545 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010519.3 | Gene: | RTN1 / 851819 | SGDID: | S000002641 | Length: | 295 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 242 | Identity: | 46/242 - (19%) |
---|---|---|---|
Similarity: | 92/242 - (38%) | Gaps: | 73/242 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 347 DLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAVHRGDGAN 411
Human 412 PFQAYLDVDLTLTR---EQTERLSHQITSRVVSAATQL----------------RHFFLVEDLVD 457
Human 458 SLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQID------------------- 503
Human 504 -------QYVGLVTNQLSHIKAKIRAKIPGTGALASAAAAVSGSKAK 543 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RTN2 | NP_005610.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..183 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 199..250 | ||||
Reticulon | 345..509 | CDD:280592 | 37/206 (18%) | ||
RTN1 | NP_010519.3 | Reticulon | 21..178 | CDD:396837 | 36/180 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 55 | 1.000 | Domainoid score | I3067 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1792 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000492 | |
OrthoInspector | 1 | 1.000 | - | - | mtm10165 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2275 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.800 |