DRSC/TRiP Functional Genomics Resources

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Protein Alignment RTN2 and RTN2

DIOPT Version :10

Sequence 1:XP_054177679.1 Gene:RTN2 / 6253 HGNCID:10468 Length:662 Species:Homo sapiens
Sequence 2:NP_010077.1 Gene:RTN2 / 851323 SGDID:S000002363 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:177 Identity:46/177 - (25%)
Similarity:88/177 - (49%) Gaps:24/177 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   465 LLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVL---QAVHR-GD 525
            |:||.:...||..|...:||||.|.:.:::||...:..::|..:.::.:..|||   ..|.| |.
Yeast    33 LIYWTNPSKSGASFAATLVSLLILRNVNVISVLLKIGYMVLFTSFAVELSTKVLFDKGVVSRFGM 97

Human   526 GANP-----FQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYIL 585
            ..:|     .:.::|.:|    ::...|..:|...|.:..|:           ::..:.:..|.|
Yeast    98 QESPDLVGVLKPHIDREL----DRLPALEDRIRKLVFAHRTR-----------NNFTIGVSLYFL 147

Human   586 TFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSH 632
            ..:.|||:..|:||:..|.|:|:||:|.:.||:||:.:..:.:.:.|
Yeast   148 HGLFAIFSMNTVLIMTTIFLYTVPLIYDRKQARIDRAIDRMKDLVIH 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RTN2XP_054177679.1 PRK07764 <99..304 CDD:236090
Reticulon 462..626 CDD:460562 45/169 (27%)
RTN2NP_010077.1 Reticulon 33..188 CDD:460562 43/163 (26%)
Blue background indicates that the domain is not in the aligned region.

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