DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPS21 and rps21

DIOPT Version :9

Sequence 1:XP_024307727.1 Gene:RPS21 / 6227 HGNCID:10409 Length:359 Species:Homo sapiens
Sequence 2:NP_001005126.1 Gene:rps21 / 448708 XenbaseID:XB-GENE-1007930 Length:83 Species:Xenopus tropicalis


Alignment Length:62 Identity:58/62 - (93%)
Similarity:61/62 - (98%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   270 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRM 331
            |||||||||||||||||||||||||||||||||:|:|||||||||||.|:||||||||||||
 Frog     1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDKVTGRFNSQYKTYAICGAIRRM 62

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPS21XP_024307727.1 Ribosomal_S21e 270..>331 CDD:307419 56/60 (93%)
rps21NP_001005126.1 Ribosomal_S21e 1..80 CDD:366538 58/62 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 149 1.000 Domainoid score I21399
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H90915
Inparanoid 1 1.050 157 1.000 Inparanoid score I12568
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG54242
OrthoDB 1 1.010 - - D1571849at2759
OrthoFinder 1 1.000 - - FOG0002785
OrthoInspector 1 1.000 - - oto156946
Panther 1 1.100 - - LDO PTHR10442
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1237
SonicParanoid 1 1.000 - - X1875
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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