DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPS17 and rps-17

DIOPT Version :10

Sequence 1:NP_001012.1 Gene:RPS17 / 6218 HGNCID:10397 Length:135 Species:Homo sapiens
Sequence 2:NP_491795.1 Gene:rps-17 / 172313 WormBaseID:WBGene00004486 Length:130 Species:Caenorhabditis elegans


Alignment Length:122 Identity:87/122 - (71%)
Similarity:102/122 - (83%) Gaps:4/122 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGP 65
            |.||||||||||:||:|||||||:.||||.|||||:|:|||.||.||||||||:||||:||:|||
 Worm     1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGP 65

Human    66 VRGISIKLQEEERERRDNYVPEVSALDQE---IIEVDPDTKEMLKLLDFGSLSNLQV 119
            |||||||||||||||||||:||:|.:|..   .|:||.||.:|||...| :|.|:.|
 Worm    66 VRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGF-NLPNVTV 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPS17NP_001012.1 Ribosomal_S17e 1..122 CDD:425895 87/122 (71%)
rps-17NP_491795.1 Ribosomal_S17e 1..123 CDD:425895 87/122 (71%)

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