DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RPS16 and rps16

DIOPT Version :10

Sequence 1:NP_001350789.1 Gene:RPS16 / 6217 HGNCID:10396 Length:152 Species:Homo sapiens
Sequence 2:NP_001011146.1 Gene:rps16 / 496563 XenbaseID:XB-GENE-5786511 Length:146 Species:Xenopus tropicalis


Alignment Length:88 Identity:80/88 - (90%)
Similarity:83/88 - (94%) Gaps:0/88 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
            ||:|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
 Frog     1 MPAKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPATLQYKLLEPVLLLGKERFAG 65

Human    66 VDIRVRVKGGGHVAQIYGESQEL 88
            |||||||||||||||:|...|.:
 Frog    66 VDIRVRVKGGGHVAQVYAIRQAI 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPS16NP_001350789.1 rpsI 6..>86 CDD:469725 75/79 (95%)
rps16NP_001011146.1 PLN00210 6..146 CDD:177799 76/83 (92%)

Return to query results.
Submit another query.