DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL13 and rpl13

DIOPT Version :10

Sequence 1:NP_000968.2 Gene:RPL13 / 6137 HGNCID:10303 Length:211 Species:Homo sapiens
Sequence 2:NP_989111.1 Gene:rpl13 / 394716 XenbaseID:XB-GENE-964820 Length:211 Species:Xenopus tropicalis


Alignment Length:211 Identity:188/211 - (89%)
Similarity:202/211 - (95%) Gaps:0/211 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
            ||||||||:|||||||||||||||||||||||||||||||.|||.:||||.|||:||:|:|||:|
 Frog     1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQVKARLVAPRPVSGPVRPVVKCPTIR 65

Human    66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRK 130
            ||||||.|||||||||:.|||:|||||||||||||||||:|||.||.|||||||||||||:||||
 Frog    66 YHTKVRMGRGFSLEELKAAGINKKVARTIGISVDPRRRNRSTEGLQTNVQRLKEYRSKLIIFPRK 130

Human   131 PSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
            |:||||||||||||||||||.|||||:|:||||||.|||||||||||||||||||||||||||||
 Frog   131 PAAPKKGDSSAEELKLATQLKGPVMPIRSVYKKEKPRVITEEEKNFKAFASLRMARANARLFGIR 195

Human   196 AKRAKEAAEQDVEKKK 211
            ||:|||||||||||||
 Frog   196 AKKAKEAAEQDVEKKK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL13NP_000968.2 Ribosomal_L13e 8..187 CDD:460150 156/178 (88%)
rpl13NP_989111.1 Ribosomal_L13e 8..187 CDD:460150 156/178 (88%)

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