DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL13 and RpL13

DIOPT Version :10

Sequence 1:NP_000968.2 Gene:RPL13 / 6137 HGNCID:10303 Length:211 Species:Homo sapiens
Sequence 2:NP_523530.1 Gene:RpL13 / 34329 FlyBaseID:FBgn0011272 Length:218 Species:Drosophila melanogaster


Alignment Length:205 Identity:129/205 - (62%)
Similarity:157/205 - (76%) Gaps:7/205 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKV 70
            |.|:...|:||.|||.|.|||||||||:||...|..||:.:.||||||.:||:|||||:|||||:
  Fly     5 NNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKL 69

Human    71 RAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPK 135
            ||||||:||||:.|||....|:||||:||.||:|||.||.|.|:||||||||||||||......:
  Fly    70 RAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIR 134

Human   136 KGDSSAEELKLATQLTGPVMPVRNVYKKEKA----RVITEEEKNFKAFASLRMARANARLFGIRA 196
            .|:||.||.||||||.|||:|::|   ::.|    |.:|::||.|||||:||.||.:|||.||||
  Fly   135 AGESSLEECKLATQLKGPVLPIKN---EQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRA 196

Human   197 KRAKEAAEQD 206
            ||||||||.:
  Fly   197 KRAKEAAESE 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL13NP_000968.2 Ribosomal_L13e 8..187 CDD:460150 112/182 (62%)
RpL13NP_523530.1 Ribosomal_L13e 7..187 CDD:460150 112/182 (62%)

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