Protein Alignment RPL13 and rpl13

DIOPT Version :10

• Sequence 1: NP_000968.2
• Gene: RPL13 / 6137
• HGNCID: 10303
• Length: 211
• Species: Homo sapiens
• Sequence 2: NP_593453.1
• Gene: rpl13 / 2543553
• PomBaseID: SPAC664.05
• Length: 208
• Species: Schizosaccharomyces pombe
• Alignment Length: 215
• Identity: 119/215 - (55%)
• Similarity: 146/215 - (67%)
• Gaps: 11/215 - (5%)

Human     1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
            ||....|.:...||||||||.|.||||||.||:|||:|||.||.:|||||... |||.|:.||:|
pombe     1 MAIHVKGQLPNAHFHKDWQRYVKTWFNQPGRKLRRRQARQTKAAKIAPRPVEA-IRPAVKPPTIR 64

Human    66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRK 130
            |:.||||||||:||||:.||:.::||.||||.||.||||:|.||||.||:|:|.|.:.||:||||
pombe    65 YNMKVRAGRGFTLEELKAAGVSRRVASTIGIPVDHRRRNRSEESLQRNVERIKVYLAHLIVFPRK 129

Human   131 PSAPKKGD----SSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARL 191
            ...|||||    |.||:..:|.     |:|:.. ...|:|:.||||.|||.||::|...||.||.
pombe   130 AGQPKKGDATDVSGAEQTDVAA-----VLPITQ-EAVEEAKPITEEAKNFNAFSTLSNERAYARY 188

Human   192 FGIRAKRAKEAAEQDVEKKK 211
            .|.||...|:.||:...|||
pombe   189 AGARAAFQKKRAEEAEAKKK 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPL13	NP_000968.2	Ribosomal_L13e	8..187	CDD:460150	103/182 (57%)
rpl13	NP_593453.1	Ribosomal_L13e	8..179	CDD:460150	102/177 (58%)