DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RPL12 and RpL12

DIOPT Version :9

Sequence 1:NP_000967.1 Gene:RPL12 / 6136 HGNCID:10302 Length:165 Species:Homo sapiens
Sequence 2:NP_524819.1 Gene:RpL12 / 45329 FlyBaseID:FBgn0034968 Length:165 Species:Drosophila melanogaster


Alignment Length:164 Identity:131/164 - (79%)
Similarity:149/164 - (90%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQ 65
            |||||||.|:|:|||||.||||||||:||||||||||||||:||||||||.|||||:|||.||||
  Fly     1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVCLTIQ 65

Human    66 NRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 130
            ||||.|.|||||::|||||||||||||||||||||||||.|::|:.|||.||.||:||||.||.|
  Fly    66 NRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCK 130

Human   131 EILGTAQSVGCNVDGRHPHDIIDDINSGAVECPA 164
            |:|||||||||.|||:||||:||::|.|::|.||
  Fly   131 EVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL12NP_000967.1 PLN03072 1..165 CDD:178621 131/164 (80%)
RpL12NP_524819.1 PLN03072 1..165 CDD:178621 131/164 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146200
Domainoid 1 1.000 120 1.000 Domainoid score I5767
eggNOG 1 0.900 - - E1_COG0080
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128047
Inparanoid 1 1.050 276 1.000 Inparanoid score I2963
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53975
OrthoDB 1 1.010 - - D1279477at2759
OrthoFinder 1 1.000 - - FOG0001897
OrthoInspector 1 1.000 - - oto91624
orthoMCL 1 0.900 - - OOG6_100843
Panther 1 1.100 - - LDO PTHR11661
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1108
SonicParanoid 1 1.000 - - X1252
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.