DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL6 and rpl6

DIOPT Version :10

Sequence 1:NP_000961.2 Gene:RPL6 / 6128 HGNCID:10362 Length:288 Species:Homo sapiens
Sequence 2:NP_588190.1 Gene:rpl6 / 2539372 PomBaseID:SPCC622.18 Length:195 Species:Schizosaccharomyces pombe


Alignment Length:207 Identity:94/207 - (45%)
Similarity:124/207 - (59%) Gaps:25/207 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    93 TKPVGGDKNGGTRVVKLRKMP------RYYPT--EDVPRKLLSHGKKPFSQHVR--KLRASITPG 147
            |..|.|.||||.|:|    :|      :|||.  |:||:|.        .:.||  |||||:.||
pombe     3 TVKVNGAKNGGERMV----LPAGEAAAKYYPAYRENVPKKA--------RKAVRPTKLRASLAPG 55

Human   148 TILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATST-KIDISNVKIPKH 211
            |:.|:|.||.||||||.|.|| ...|:||||..:|.||:||.:.::|||||. |||:|.|.:.| 
pombe    56 TVCILLAGRFRGKRVVVLSQL-EDTLVVTGPYKVNGVPIRRVNHRYVIATSAPKIDVSGVSVEK- 118

Human   212 LTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFA 276
            .|.|||.|:|...|..::...|.....|..:..:|..||||||:::||.|||||.::.||.:.||
pombe   119 FTKAYFAKQKRSGPVKKDEAFFAENAPKNALPAERIADQKAVDAKLLPAIKAIPNMKEYLAASFA 183

Human   277 LTNGIYPHKLVF 288
            |:||..||.:.|
pombe   184 LSNGDRPHLMKF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL6NP_000961.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
Ribosomal_L6e_N 36..95 CDD:427554 1/1 (100%)
KOW_RPL6 136..288 CDD:240520 76/154 (49%)
rpl6NP_588190.1 KOW_RPL6 44..195 CDD:240520 75/152 (49%)
Blue background indicates that the domain is not in the aligned region.

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