DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL6 and Rpl6

DIOPT Version :10

Sequence 1:NP_000961.2 Gene:RPL6 / 6128 HGNCID:10362 Length:288 Species:Homo sapiens
Sequence 2:NP_035420.2 Gene:Rpl6 / 19988 MGIID:108057 Length:296 Species:Mus musculus


Alignment Length:298 Identity:257/298 - (86%)
Similarity:270/298 - (90%) Gaps:12/298 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAGEKVEKPDTKEKKPEAKKV--DAGGK-------VKKGNLKAKKPKKGKPHCSRNPVLVRGIGR 56
            |||||.  ||||||||.|||.  ||...       .||.:.|.|||||.||||||||||||||||
Mouse     1 MAGEKA--PDTKEKKPAAKKAGSDAAASRPRAAKVAKKVHPKGKKPKKAKPHCSRNPVLVRGIGR 63

Human    57 YSRSAMYSRKAMYKRKYSAAKSKVE-KKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 120
            |||||||||||:|||||||||:||| |||||||||||||.|||||||||||||||||||||||||
Mouse    64 YSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGTRVVKLRKMPRYYPTED 128

Human   121 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
            ||||||||||||||||||:||:||||||:|||||||||||||||||||.|||||||||||:||||
Mouse   129 VPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVP 193

Human   186 LRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQ 250
            |||||||||||||||:|||:|||||||||||||||:||||||||||||||||||||||||||.||
Mouse   194 LRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDTEKEKYEITEQRKADQ 258

Human   251 KAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF 288
            ||||.||||||||:|||||||||.|:||||:|||||||
Mouse   259 KAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL6NP_000961.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 32/55 (58%)
Ribosomal_L6e_N 36..95 CDD:427554 55/59 (93%)
KOW_RPL6 136..288 CDD:240520 137/151 (91%)
Rpl6NP_035420.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 30/53 (57%)
Ribosomal_L6e_N 50..103 CDD:427554 49/52 (94%)
KOW_RPL6 144..296 CDD:240520 137/151 (91%)

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