DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL5 and rpl501

DIOPT Version :9

Sequence 1:NP_000960.2 Gene:RPL5 / 6125 HGNCID:10360 Length:297 Species:Homo sapiens
Sequence 2:NP_594180.1 Gene:rpl501 / 2543642 PomBaseID:SPAC3H5.12c Length:294 Species:Schizosaccharomyces pombe


Alignment Length:287 Identity:141/287 - (49%)
Similarity:200/287 - (69%) Gaps:4/287 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIA 65
            |.|:|.||:..||.|||.|:||||||||||||||||:.|.|||||.||||::||.:||.:.|||.
pombe     1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIV 65

Human    66 YARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEY 130
            .:|:.||.::..|::.|||:||:|.||.|:.|||.||||:|||.|.:.|:...|||..|..|:..
pombe    66 SSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFE 130

Human   131 NVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
            ..|:|:..|..|..:||.||.||:||::||||:|||.||||.||||..||||:|.|::|.:.|..
pombe   131 LTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETL 195

Human   196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKK- 259
            ||:|.|.:||:||..|:::||:.|:||||..|.:.:..|.:|::|.:|:|.|||:|.::|..|. 
pombe   196 RKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDA 260

Human   260 ---EVKKKRWNRPKMSLAQKKDRVAQK 283
               :.:..:..:.|::..::|:|...|
pombe   261 AAFKAESLKHTQRKLTAEERKERFNAK 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL5NP_000960.2 PTZ00069 1..295 CDD:240254 141/287 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..297 6/35 (17%)
rpl501NP_594180.1 PTZ00069 1..291 CDD:240254 141/287 (49%)
Ribosomal_L18p 26..173 CDD:279233 81/146 (55%)
Ribosomal_L18_c 193..283 CDD:290906 31/89 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 198 1.000 Domainoid score I775
eggNOG 1 0.900 - - E1_COG0256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110649
Inparanoid 1 1.050 294 1.000 Inparanoid score I717
OMA 1 1.010 - - QHG53582
OrthoFinder 1 1.000 - - FOG0002632
OrthoInspector 1 1.000 - - otm53996
orthoMCL 1 0.900 - - OOG6_100789
Panther 1 1.100 - - LDO PTHR23410
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1142
SonicParanoid 1 1.000 - - X1734
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.860

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