DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPL3 and mRpL3

DIOPT Version :10

Sequence 1:NP_000958.1 Gene:RPL3 / 6122 HGNCID:10332 Length:403 Species:Homo sapiens
Sequence 2:NP_511166.2 Gene:mRpL3 / 32523 FlyBaseID:FBgn0030686 Length:362 Species:Drosophila melanogaster


Alignment Length:180 Identity:40/180 - (22%)
Similarity:59/180 - (32%) Gaps:55/180 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   186 NGGTVAEKLDWAR------ERLEQQVPVN-QVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-- 241
            |.|.:.:| :.||      .:|....|:| ..|...:.:||.|.|...|::||..|...|.:|  
  Fly   180 NSGVLPKK-NLARFIVSPEAQLAPGTPLNVNHFRVGDFVDVRGKTVDHGFQGVVKRHGFKGMPAS 243

Human   242 ---RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 303
               .||||....:.  |.....||.......|..|...|.....::::|                
  Fly   244 HGVTKTHRRAGNIG--GGGEKGRVWPGTKMPGHMGNRWRIIKGLRVWRI---------------- 290

Human   304 STDYDL----SDKSINPLGGFVH--------------------YGEVTND 329
            :|.|::    ......|.||.|:                    |||...|
  Fly   291 NTKYNVMWVQGSSVAGPTGGLVYIYDTILPTRKNKEAPPFPTFYGEPQQD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL3NP_000958.1 PTZ00103 1..400 CDD:240267 40/180 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
mRpL3NP_511166.2 rpl3p 101..314 CDD:444836 36/152 (24%)
Blue background indicates that the domain is not in the aligned region.

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