Sequence 1: | NP_001030025.1 | Gene: | RPGR / 6103 | HGNCID: | 10295 | Length: | 1152 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
Alignment Length: | 679 | Identity: | 153/679 - (22%) |
---|---|---|---|
Similarity: | 244/679 - (35%) | Gaps: | 199/679 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 8 MPDSGAVFTFGKSKFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK 72
Human 73 SAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137
Human 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGD--NSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYY 200
Human 201 HSAFVTTDGELYVFGEPENGKLG-------------------LPNQLL----------------- 229
Human 230 -------------GNHRTPQLVSEIPEK-------------VIQVACGGEHTVVLTEN-AVYTFG 267
Human 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE 332
Human 333 NFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVAKEIEFDEINDTCLSVATFLPYSSLT 397
Human 398 SGNVLQRTLSARMRRRERERSPDSFSMRRTLPPIEGTLGLSACFLPNSVFPRCSERNLQESVLSE 462
Human 463 QDLMQPEEPDYLLDEMTKEAE-IDNSSTVESLGETTDILNMTHIMSLNSNEKSLKLSPVQKQKKQ 526
Human 527 QTIGELTQDTALTENDDSDEYEEMSEMKEGKACKQHVSQGIFMTQPATTIEAFSDEEVEIPEEKE 591
Human 592 GAEDSKGNGIEEQEVEANEENVKVHGGRK 620 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RPGR | NP_001030025.1 | RCC1 | <38..312 | CDD:332518 | 91/338 (27%) |
RCC1 | 314..360 | CDD:306840 | 12/45 (27%) | ||
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 17/49 (35%) |
RCC1 | 92..141 | CDD:278826 | 17/49 (35%) | ||
RCC1_2 | 131..158 | CDD:290274 | 14/26 (54%) | ||
RCC1 | 144..193 | CDD:278826 | 16/48 (33%) | ||
RCC1_2 | 182..209 | CDD:290274 | 8/26 (31%) | ||
RCC1 | 363..414 | CDD:278826 | 14/77 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165143341 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |