DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ROS1 and Sdr

DIOPT Version :9

Sequence 1:XP_011534351.1 Gene:ROS1 / 6098 HGNCID:10261 Length:2357 Species:Homo sapiens
Sequence 2:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster


Alignment Length:1070 Identity:190/1070 - (17%)
Similarity:342/1070 - (31%) Gaps:384/1070 - (35%)


- Green bases have known domain annotations that are detailed below.


Human   788 TDIVTHVKLLVNDMVVDSVGGYLYWTTLYSVESTRLNGESSLVLQTQPWFSGKKVIALTLDLSDG 852
            |.:|.||:|...|:.  .|.|.      ||::|...|                     ..::||.
  Fly    60 THVVGHVRLAYVDLT--DVSGN------YSLDSLASN---------------------VTEISDY 95

Human   853 LLYWLVQDSQCIHLYT--------AVLRGQSSTGDTTITEFAAWSTSEISQNALMYYSGRLFWIN 909
            |:.:     :|..|.:        .::|||....|               |.:|:.|..|     
  Fly    96 LMVY-----RCTGLISLQSIFPRLRIIRGQELLFD---------------QYSLVVYENR----- 135

Human   910 GFRIITTQEIGQKTSVSVLEPARFNQFTIIQTSLKPLPGNFSFTPKV----IPDSVQESSFRIEG 970
                 ..:|:|      ::|..|. |...|:....||   ..|...|    :..:.....|.::.
  Fly   136 -----NLRELG------LVELLRI-QSGFIRVESNPL---LCFVETVDWIYLMGNATRQHFSLKH 185

Human   971 NASSFQILWNGPPAVDWGVVFYSVEFSAHSKFLASEQHSLPVFTVEGLEPYALFNLSVTPYTYWG 1035
            |....|....|..:.|:       ||..:|    ||:               .:|::.|      
  Fly   186 NRPQSQCPLCGSLSADF-------EFIRNS----SER---------------CWNVNTT------ 218

Human  1036 KGPKTSLSLRAPETVPSAPENPRIFILP----------SGKCCNKNEVVVEFRWNKPKHEN---- 1086
                   .||        |:.||:...|          :||||:.|.|...:..|.....|    
  Fly   219 -------QLR--------PQPPRLKDCPIACGLNGCDSAGKCCDHNCVTGCYSQNCSLCANYQGR 268

Human  1087 -GVLTKFEIFYNIS-NQSITNKTCEDWIAVNVTPSVMSFQLEGMSPRCFIAFQVRAFTSKG---- 1145
             |.:.:....|.:: .:.|.::.|.:   :...|.:..:|.....|    ..|.....:||    
  Fly   269 MGCVNQCVASYELNKRRCIGHRECRE---LGRIPLIRGYQCVKKCP----GNQKEILVAKGIIHC 326

Human  1146 ----PGPYADVVKSTTSEINPFPHLITLLGNKIVFLDMDQNQVVWTFSAERVISAVCYTADNEM- 1205
                .|.:.  ||| .:::......:|:.|:..:.|         |...|:::.|:    :|.: 
  Fly   327 QVECNGDFH--VKS-AADLEVLQDCVTINGSLTIEL---------TNIKEKIVDAL----ENALA 375

Human  1206 ------GYYAEGDSLFLLHLHNRSSSELFQDSLVFDITVITIDWISRHLYFALKESQNGMQVFDV 1264
                  ||      |.::|     |::|...:.:.::..|..|.:..:.| ||....|      .
  Fly   376 SVKEITGY------LKVIH-----SAQLMSLTFLQNLDAIRGDKLVENKY-ALYVVNN------Y 422

Human  1265 DLEHKVKYPREVKIHNRNSTIISFSVYPLLSRLYWTEVSNFGYQMFYYSIISHTLHRILQPTATN 1329
            .||| :..|..:.|..|.:  :.|.:.|   ||.:.::                 |: ||.:..:
  Fly   423 HLEH-IWPPNHLVIIQRGT--LFFHLNP---RLCYEKI-----------------HQ-LQGSLKS 463

Human  1330 QQNKRNQCSCNVTEFELSGAMAIDTSNLEKPLIYFA------KAQEIWA---------MDLEGCQ 1379
            .:|             :|.|.....||.|:.:...|      |.:::.:         ||.||.:
  Fly   464 GEN-------------ISVADVSPNSNGERVICGDAVRSLNPKVEDLNSTAVRIILDYMDWEGME 515

Human  1380 CWRVITVPAMLAGKTLVSLTVDGDLIYWIITAKDSTQIYQAKKGNGA---IVSQVKALRSRHILA 1441
                               |:.|...::......:..:|..:.|.|.   ::..|.....||:: 
  Fly   516 -------------------TLIGYSYHYKEAPVQNVTMYDGRHGCGHDNWLMDVVPNQSRRHVI- 560

Human  1442 YSSVMQPFPDKAFLSLASDTVEPTILNATNTSLTIRLPLAKTNLTWYGI--TSPTPTYLVYYAEV 1504
              |.::|:...|:.          :...|.|...|::. |.:.:.::..  ..|:|...:|    
  Fly   561 --SGLKPYTQYAYF----------VKTLTRTEYHIQID-AYSKIGYFQTLPDRPSPVLRIY---- 608

Human  1505 NDRKNSSDLKYRILEFQDSIALIEDLQPFSTYMIQIAVKNYYSDPLEHLPPGKEIWGKTKNGVPE 1569
                .||::..:||           |..:........:|||:. ..|.....||  .|.||.|  
  Fly   609 ----GSSEISSQIL-----------LHWWPPRRPNGVIKNYFV-TAEKYNATKE--AKDKNYV-- 653

Human  1570 AVQLINT-TVRSDTSLIISWRESHKPNGP----KESVRYQLAISHLALIPET-PLRQSEFPNGRL 1628
            .|:|.|. .:..:.:.::.:....:|:..    ||.:.|:.|:.:|..:... ..|:.||.    
  Fly   654 NVELENAKDIDCECAGVLPYYSGPQPDDEDYYNKEQITYEDALPNLIYVSRNHDYRRKEFE---- 714

Human  1629 TLLVTRLSGGNIYVLKVLACHSEEMWCTESHPVTVEMFNTPEKPYSL--VPENTSLQFNWKAPLN 1691
                           ||:         ...|.::::....|.:|.:.  .|.|.:|.....|.:|
  Fly   715 ---------------KVI---------NYEHLLSIKKDEEPTRPPTTTPAPTNATLAKERLAAIN 755

Human  1692 VNLIRFWVE--------LQKWKYNEFYHVKTSCSQGPAYVCN----------------------- 1725
            ....|...|        |.:.||. ..|....|....|.|..                       
  Fly   756 YENYRLNSEKKQRDLQDLDQHKYT-IRHALPKCQNSHASVVQQVEEKCVAEEPLSGYELPGTQHF 819

Human  1726 --ITNLQPYTSYNVRVVVVYKTGENSTSLP 1753
              ::.|:|.|.|.:.:....:...|..|.|
  Fly   820 YCLSQLEPETHYRITIRACVEGVVNGCSTP 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROS1XP_011534351.1 None
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 35/181 (19%)
Furin-like 209..332 CDD:279142 28/165 (17%)
Recep_L_domain 347..461 CDD:279382 32/168 (19%)
FN3 491..578 CDD:214495 16/118 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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